Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CDC34P49427 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC34P49427 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDC34P49427 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.11□□□□□ -0.15
CDC34P49427 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.1□□□□□ -0.15
CDC34P49427 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.1□□□□□ -0.15
CDC34P49427 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDC34P49427 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.1□□□□□ -0.15
CDC34P49427 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.1□□□□□ -0.15
CDC34P49427 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.1□□□□□ -0.15
CDC34P49427 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.1□□□□□ -0.15
CDC34P49427 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDC34P49427 AC083880.1-201ENST00000608266 535 ntBASIC14.1□□□□□ -0.15
CDC34P49427 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.1□□□□□ -0.15
CDC34P49427 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.1□□□□□ -0.15
CDC34P49427 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDC34P49427 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.1□□□□□ -0.15
CDC34P49427 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDC34P49427 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.1□□□□□ -0.15
CDC34P49427 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC34P49427 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CDC34P49427 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CDC34P49427 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC34P49427 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC34P49427 HLA-J-201ENST00000462773 1622 ntBASIC14.09□□□□□ -0.15
CDC34P49427 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.09□□□□□ -0.15
CDC34P49427 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.09□□□□□ -0.15
CDC34P49427 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 AL023284.2-201ENST00000405850 579 ntBASIC14.09□□□□□ -0.15
CDC34P49427 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.09□□□□□ -0.15
CDC34P49427 CROCCP5-201ENST00000436658 830 ntBASIC14.09□□□□□ -0.15
CDC34P49427 AC006970.2-201ENST00000450065 779 ntBASIC14.09□□□□□ -0.15
CDC34P49427 KRT16P5-201ENST00000455284 522 ntBASIC14.09□□□□□ -0.15
CDC34P49427 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.09□□□□□ -0.15
CDC34P49427 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.09□□□□□ -0.15
CDC34P49427 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC34P49427 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC34P49427 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CDC34P49427 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC34P49427 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDC34P49427 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.09□□□□□ -0.15
CDC34P49427 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 LINC00304-203ENST00000565008 1864 ntBASIC14.09□□□□□ -0.15
CDC34P49427 PCDHA14-201ENST00000506751 2298 ntBASIC14.09□□□□□ -0.15
CDC34P49427 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC34P49427 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.09□□□□□ -0.15
CDC34P49427 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CDC34P49427 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CDC34P49427 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.09□□□□□ -0.15
CDC34P49427 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.09□□□□□ -0.15
CDC34P49427 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDC34P49427 AC105020.1-201ENST00000435356 2205 ntBASIC14.09□□□□□ -0.15
CDC34P49427 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDC34P49427 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.08□□□□□ -0.15
CDC34P49427 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CDC34P49427 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms