Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.48■□□□□ 0.23
HTR3AP46098 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HTR3AP46098 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.48■□□□□ 0.23
HTR3AP46098 REXO1L9P-201ENST00000604264 2108 ntBASIC16.48■□□□□ 0.23
HTR3AP46098 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HTR3AP46098 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
HTR3AP46098 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 AL162727.3-201ENST00000635661 2787 ntBASIC16.48■□□□□ 0.23
HTR3AP46098 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.48■□□□□ 0.23
HTR3AP46098 SPDYE15P-201ENST00000424157 909 ntBASIC16.48■□□□□ 0.23
HTR3AP46098 SLC25A6P5-201ENST00000435663 894 ntBASIC16.48■□□□□ 0.23
HTR3AP46098 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.48■□□□□ 0.23
HTR3AP46098 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.48■□□□□ 0.23
HTR3AP46098 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.48■□□□□ 0.23
HTR3AP46098 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.48■□□□□ 0.23
HTR3AP46098 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HTR3AP46098 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.47■□□□□ 0.23
HTR3AP46098 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
HTR3AP46098 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.47■□□□□ 0.23
HTR3AP46098 AL118508.1-201ENST00000613502 2345 ntBASIC16.47■□□□□ 0.23
HTR3AP46098 AC108860.2-201ENST00000562760 2183 ntBASIC16.47■□□□□ 0.23
HTR3AP46098 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
HTR3AP46098 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HTR3AP46098 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
HTR3AP46098 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 RCN1P1-201ENST00000400413 996 ntBASIC16.47■□□□□ 0.23
HTR3AP46098 HLA-F-220ENST00000434407 884 ntBASIC16.47■□□□□ 0.23
HTR3AP46098 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.47■□□□□ 0.23
HTR3AP46098 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.47■□□□□ 0.23
HTR3AP46098 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.47■□□□□ 0.23
HTR3AP46098 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.47■□□□□ 0.23
HTR3AP46098 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.47■□□□□ 0.23
HTR3AP46098 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HTR3AP46098 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HTR3AP46098 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HTR3AP46098 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HTR3AP46098 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HTR3AP46098 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.46■□□□□ 0.23
HTR3AP46098 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HTR3AP46098 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HTR3AP46098 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HTR3AP46098 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HTR3AP46098 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
HTR3AP46098 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HTR3AP46098 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HTR3AP46098 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HTR3AP46098 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HTR3AP46098 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 CICP6-201ENST00000457191 2729 ntBASIC16.46■□□□□ 0.23
HTR3AP46098 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.46■□□□□ 0.23
HTR3AP46098 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.46■□□□□ 0.23
HTR3AP46098 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTR3AP46098 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.46■□□□□ 0.23
HTR3AP46098 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.46■□□□□ 0.23
HTR3AP46098 TMPOP1-202ENST00000424642 1267 ntBASIC16.46■□□□□ 0.23
HTR3AP46098 KRT18P48-201ENST00000434763 852 ntBASIC16.46■□□□□ 0.23
HTR3AP46098 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.46■□□□□ 0.23
HTR3AP46098 AC063952.2-201ENST00000498792 1227 ntBASIC16.46■□□□□ 0.23
HTR3AP46098 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.46■□□□□ 0.23
HTR3AP46098 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
HTR3AP46098 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HTR3AP46098 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HTR3AP46098 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms