Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.54■□□□□ 0.56
MMP13P45452 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MMP13P45452 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
MMP13P45452 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MMP13P45452 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.54■□□□□ 0.56
MMP13P45452 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.54■□□□□ 0.56
MMP13P45452 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.54■□□□□ 0.56
MMP13P45452 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MMP13P45452 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 AC024563.2-201ENST00000603282 481 ntBASIC18.54■□□□□ 0.56
MMP13P45452 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
MMP13P45452 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.54■□□□□ 0.56
MMP13P45452 LINC00602-201ENST00000629776 2065 ntBASIC18.54■□□□□ 0.56
MMP13P45452 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
MMP13P45452 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.54■□□□□ 0.56
MMP13P45452 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MMP13P45452 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.53■□□□□ 0.56
MMP13P45452 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.53■□□□□ 0.56
MMP13P45452 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP13P45452 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.53■□□□□ 0.56
MMP13P45452 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.53■□□□□ 0.56
MMP13P45452 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.53■□□□□ 0.56
MMP13P45452 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.53■□□□□ 0.56
MMP13P45452 NTF6B-201ENST00000591913 560 ntBASIC18.53■□□□□ 0.56
MMP13P45452 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
MMP13P45452 AC083849.1-201ENST00000615227 514 ntBASIC18.53■□□□□ 0.56
MMP13P45452 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP13P45452 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
MMP13P45452 AL590326.2-201ENST00000625139 305 ntBASIC18.53■□□□□ 0.56
MMP13P45452 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.53■□□□□ 0.56
MMP13P45452 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MMP13P45452 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
MMP13P45452 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MMP13P45452 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP13P45452 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MMP13P45452 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MMP13P45452 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP13P45452 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.52■□□□□ 0.56
MMP13P45452 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP13P45452 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.52■□□□□ 0.56
MMP13P45452 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 VENTXP5-201ENST00000523979 775 ntBASIC18.52■□□□□ 0.56
MMP13P45452 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.52■□□□□ 0.56
MMP13P45452 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.52■□□□□ 0.56
MMP13P45452 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MMP13P45452 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MMP13P45452 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MMP13P45452 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
MMP13P45452 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
MMP13P45452 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
MMP13P45452 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MMP13P45452 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP13P45452 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MMP13P45452 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.51■□□□□ 0.55
MMP13P45452 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MMP13P45452 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MMP13P45452 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms