Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.85■□□□□ 0.61
CTNNA1P35221 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CTNNA1P35221 HMGA1P5-201ENST00000412453 271 ntBASIC18.85■□□□□ 0.61
CTNNA1P35221 PVRIG2P-201ENST00000435460 978 ntBASIC18.85■□□□□ 0.61
CTNNA1P35221 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.85■□□□□ 0.61
CTNNA1P35221 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.85■□□□□ 0.61
CTNNA1P35221 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CTNNA1P35221 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTNNA1P35221 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CTNNA1P35221 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTNNA1P35221 AC022211.2-201ENST00000585075 2527 ntBASIC18.84■□□□□ 0.61
CTNNA1P35221 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CTNNA1P35221 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CTNNA1P35221 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.84■□□□□ 0.61
CTNNA1P35221 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.84■□□□□ 0.61
CTNNA1P35221 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.84■□□□□ 0.61
CTNNA1P35221 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.84■□□□□ 0.61
CTNNA1P35221 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.84■□□□□ 0.61
CTNNA1P35221 ECEL1P2-202ENST00000465689 757 ntBASIC18.84■□□□□ 0.61
CTNNA1P35221 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.84■□□□□ 0.61
CTNNA1P35221 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.84■□□□□ 0.61
CTNNA1P35221 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.84■□□□□ 0.61
CTNNA1P35221 AC133963.1-201ENST00000504166 1679 ntBASIC18.84■□□□□ 0.61
CTNNA1P35221 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTNNA1P35221 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CTNNA1P35221 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.84■□□□□ 0.61
CTNNA1P35221 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.84■□□□□ 0.61
CTNNA1P35221 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CTNNA1P35221 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNNA1P35221 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CTNNA1P35221 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNNA1P35221 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.83■□□□□ 0.61
CTNNA1P35221 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CTNNA1P35221 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNNA1P35221 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNNA1P35221 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CTNNA1P35221 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CTNNA1P35221 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
CTNNA1P35221 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNNA1P35221 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNNA1P35221 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNNA1P35221 AC022898.2-201ENST00000616822 1312 ntBASIC18.83■□□□□ 0.61
CTNNA1P35221 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.83■□□□□ 0.61
CTNNA1P35221 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNNA1P35221 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNNA1P35221 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNNA1P35221 MMP23A-201ENST00000234610 1017 ntBASIC18.83■□□□□ 0.6
CTNNA1P35221 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.83■□□□□ 0.6
CTNNA1P35221 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.83■□□□□ 0.6
CTNNA1P35221 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTNNA1P35221 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CTNNA1P35221 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNNA1P35221 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CTNNA1P35221 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.83■□□□□ 0.6
CTNNA1P35221 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.83■□□□□ 0.6
CTNNA1P35221 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CTNNA1P35221 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTNNA1P35221 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.83■□□□□ 0.6
CTNNA1P35221 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.83■□□□□ 0.6
CTNNA1P35221 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTNNA1P35221 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CTNNA1P35221 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTNNA1P35221 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTNNA1P35221 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.83■□□□□ 0.6
CTNNA1P35221 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTNNA1P35221 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNNA1P35221 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms