Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PTX3P26022 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTX3P26022 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.12■□□□□ 0.33
PTX3P26022 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTX3P26022 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTX3P26022 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PTX3P26022 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTX3P26022 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTX3P26022 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTX3P26022 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.12■□□□□ 0.33
PTX3P26022 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.12■□□□□ 0.33
PTX3P26022 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.12■□□□□ 0.33
PTX3P26022 AC112698.1-201ENST00000510299 916 ntBASIC17.12■□□□□ 0.33
PTX3P26022 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.12■□□□□ 0.33
PTX3P26022 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.12■□□□□ 0.33
PTX3P26022 AL390719.2-201ENST00000606993 987 ntBASIC17.12■□□□□ 0.33
PTX3P26022 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.12■□□□□ 0.33
PTX3P26022 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PTX3P26022 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTX3P26022 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTX3P26022 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PTX3P26022 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTX3P26022 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTX3P26022 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.12■□□□□ 0.33
PTX3P26022 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.12■□□□□ 0.33
PTX3P26022 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTX3P26022 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PTX3P26022 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTX3P26022 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTX3P26022 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
PTX3P26022 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTX3P26022 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.11■□□□□ 0.33
PTX3P26022 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTX3P26022 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PTX3P26022 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTX3P26022 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTX3P26022 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.11■□□□□ 0.33
PTX3P26022 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.11■□□□□ 0.33
PTX3P26022 SPDYE13P-201ENST00000445314 798 ntBASIC17.11■□□□□ 0.33
PTX3P26022 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTX3P26022 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.11■□□□□ 0.33
PTX3P26022 AL049597.2-201ENST00000565575 961 ntBASIC17.11■□□□□ 0.33
PTX3P26022 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTX3P26022 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTX3P26022 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTX3P26022 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTX3P26022 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTX3P26022 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTX3P26022 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTX3P26022 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTX3P26022 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTX3P26022 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 Z83836.1-201ENST00000624605 1642 ntBASIC17.1■□□□□ 0.33
PTX3P26022 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.1■□□□□ 0.33
PTX3P26022 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.1■□□□□ 0.33
PTX3P26022 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.1■□□□□ 0.33
PTX3P26022 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.1■□□□□ 0.33
PTX3P26022 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 FAM210CP-201ENST00000445714 574 ntBASIC17.1■□□□□ 0.33
PTX3P26022 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 AC068472.1-201ENST00000474589 881 ntBASIC17.1■□□□□ 0.33
PTX3P26022 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.1■□□□□ 0.33
PTX3P26022 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.1■□□□□ 0.33
PTX3P26022 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
PTX3P26022 RNF126P1-202ENST00000569893 925 ntBASIC17.1■□□□□ 0.33
PTX3P26022 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.1■□□□□ 0.33
PTX3P26022 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.1■□□□□ 0.33
PTX3P26022 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.1■□□□□ 0.33
PTX3P26022 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PTX3P26022 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTX3P26022 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTX3P26022 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTX3P26022 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.09■□□□□ 0.33
PTX3P26022 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTX3P26022 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTX3P26022 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.09■□□□□ 0.33
PTX3P26022 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTX3P26022 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.09■□□□□ 0.33
PTX3P26022 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTX3P26022 AL645929.1-201ENST00000420084 975 ntBASIC17.09■□□□□ 0.33
PTX3P26022 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.09■□□□□ 0.33
PTX3P26022 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.09■□□□□ 0.33
PTX3P26022 AL136038.3-201ENST00000561909 1096 ntBASIC17.09■□□□□ 0.33
PTX3P26022 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.09■□□□□ 0.33
PTX3P26022 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTX3P26022 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms