Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMA1P25391 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LAMA1P25391 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LAMA1P25391 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
LAMA1P25391 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.32■□□□□ 0.36
LAMA1P25391 ELK2BP-201ENST00000415014 1224 ntBASIC17.32■□□□□ 0.36
LAMA1P25391 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.32■□□□□ 0.36
LAMA1P25391 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.32■□□□□ 0.36
LAMA1P25391 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.32■□□□□ 0.36
LAMA1P25391 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.32■□□□□ 0.36
LAMA1P25391 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.32■□□□□ 0.36
LAMA1P25391 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LAMA1P25391 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LAMA1P25391 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LAMA1P25391 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.32■□□□□ 0.36
LAMA1P25391 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LAMA1P25391 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.31■□□□□ 0.36
LAMA1P25391 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LAMA1P25391 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LAMA1P25391 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.31■□□□□ 0.36
LAMA1P25391 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LAMA1P25391 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LAMA1P25391 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LAMA1P25391 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LAMA1P25391 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.31■□□□□ 0.36
LAMA1P25391 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.31■□□□□ 0.36
LAMA1P25391 UGT1A2P-201ENST00000454886 866 ntBASIC17.31■□□□□ 0.36
LAMA1P25391 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
LAMA1P25391 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.31■□□□□ 0.36
LAMA1P25391 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LAMA1P25391 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LAMA1P25391 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.31■□□□□ 0.36
LAMA1P25391 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.31■□□□□ 0.36
LAMA1P25391 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LAMA1P25391 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA1P25391 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA1P25391 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA1P25391 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
LAMA1P25391 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA1P25391 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LAMA1P25391 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.3■□□□□ 0.36
LAMA1P25391 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA1P25391 KLF4P1-201ENST00000412782 1185 ntBASIC17.3■□□□□ 0.36
LAMA1P25391 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.3■□□□□ 0.36
LAMA1P25391 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.3■□□□□ 0.36
LAMA1P25391 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.3■□□□□ 0.36
LAMA1P25391 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.3■□□□□ 0.36
LAMA1P25391 AC093520.2-201ENST00000561830 333 ntBASIC17.3■□□□□ 0.36
LAMA1P25391 AL390955.2-201ENST00000603032 514 ntBASIC17.3■□□□□ 0.36
LAMA1P25391 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.3■□□□□ 0.36
LAMA1P25391 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA1P25391 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA1P25391 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA1P25391 AC135776.1-201ENST00000319817 2481 ntBASIC17.3■□□□□ 0.36
LAMA1P25391 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.3■□□□□ 0.36
LAMA1P25391 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA1P25391 AC244107.1-201ENST00000442033 332 ntBASIC17.3■□□□□ 0.36
LAMA1P25391 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.3■□□□□ 0.36
LAMA1P25391 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.3■□□□□ 0.36
LAMA1P25391 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.3■□□□□ 0.36
LAMA1P25391 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.3■□□□□ 0.36
LAMA1P25391 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.3■□□□□ 0.36
LAMA1P25391 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.3■□□□□ 0.36
LAMA1P25391 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA1P25391 IGHV3-65-201ENST00000523210 341 ntBASIC17.29■□□□□ 0.36
LAMA1P25391 MIR4751-201ENST00000578027 74 ntBASIC17.29■□□□□ 0.36
LAMA1P25391 AL022326.1-202ENST00000641533 845 ntBASIC17.29■□□□□ 0.36
LAMA1P25391 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA1P25391 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.29■□□□□ 0.36
LAMA1P25391 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA1P25391 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA1P25391 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.29■□□□□ 0.36
LAMA1P25391 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LAMA1P25391 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.29■□□□□ 0.36
LAMA1P25391 AC023141.5-201ENST00000458585 616 ntBASIC17.29■□□□□ 0.36
LAMA1P25391 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA1P25391 AC010507.1-201ENST00000633895 436 ntBASIC17.29■□□□□ 0.36
LAMA1P25391 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms