Protein–RNA interactions for Protein: P21860

ERBB3, Receptor tyrosine-protein kinase erbB-3, humanhuman

Predictions only

Length 1,342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3P21860 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ERBB3P21860 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC23.33■■□□□ 1.33
ERBB3P21860 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC23.33■■□□□ 1.33
ERBB3P21860 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC23.33■■□□□ 1.33
ERBB3P21860 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
ERBB3P21860 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ERBB3P21860 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ERBB3P21860 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ERBB3P21860 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
ERBB3P21860 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ERBB3P21860 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ERBB3P21860 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ERBB3P21860 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.33■■□□□ 1.33
ERBB3P21860 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
ERBB3P21860 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ERBB3P21860 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC23.33■■□□□ 1.33
ERBB3P21860 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.33■■□□□ 1.33
ERBB3P21860 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ERBB3P21860 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.33■■□□□ 1.33
ERBB3P21860 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
ERBB3P21860 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
ERBB3P21860 AC009949.1-201ENST00000623048 1830 ntBASIC23.33■■□□□ 1.32
ERBB3P21860 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ERBB3P21860 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ERBB3P21860 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.33■■□□□ 1.32
ERBB3P21860 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.33■■□□□ 1.32
ERBB3P21860 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC23.33■■□□□ 1.32
ERBB3P21860 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC23.33■■□□□ 1.32
ERBB3P21860 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC23.33■■□□□ 1.32
ERBB3P21860 BCAR1-209ENST00000546196 1340 ntBASIC23.32■■□□□ 1.32
ERBB3P21860 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.32■■□□□ 1.32
ERBB3P21860 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.32■■□□□ 1.32
ERBB3P21860 AC097637.2-201ENST00000624096 1997 ntBASIC23.32■■□□□ 1.32
ERBB3P21860 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC23.32■■□□□ 1.32
ERBB3P21860 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 PNMT-202ENST00000394246 821 ntTSL 2 BASIC23.32■■□□□ 1.32
ERBB3P21860 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC23.32■■□□□ 1.32
ERBB3P21860 DDX43P3-201ENST00000441064 443 ntBASIC23.32■■□□□ 1.32
ERBB3P21860 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC23.32■■□□□ 1.32
ERBB3P21860 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ERBB3P21860 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.31■■□□□ 1.32
ERBB3P21860 BX276092.7-203ENST00000637198 1536 ntBASIC23.31■■□□□ 1.32
ERBB3P21860 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 AC093677.2-201ENST00000600169 1863 ntBASIC23.31■■□□□ 1.32
ERBB3P21860 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
ERBB3P21860 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.31■■□□□ 1.32
ERBB3P21860 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC23.31■■□□□ 1.32
ERBB3P21860 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.31■■□□□ 1.32
ERBB3P21860 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC23.31■■□□□ 1.32
ERBB3P21860 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ERBB3P21860 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ERBB3P21860 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC23.31■■□□□ 1.32
ERBB3P21860 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ERBB3P21860 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
ERBB3P21860 STOM-202ENST00000347359 870 ntTSL 2 BASIC23.31■■□□□ 1.32
ERBB3P21860 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC23.31■■□□□ 1.32
ERBB3P21860 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC23.31■■□□□ 1.32
ERBB3P21860 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC23.31■■□□□ 1.32
ERBB3P21860 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC23.31■■□□□ 1.32
ERBB3P21860 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ERBB3P21860 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ERBB3P21860 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC23.3■■□□□ 1.32
ERBB3P21860 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ERBB3P21860 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ERBB3P21860 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.3■■□□□ 1.32
ERBB3P21860 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ERBB3P21860 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ERBB3P21860 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ERBB3P21860 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC23.3■■□□□ 1.32
ERBB3P21860 LINC00982-205ENST00000420957 435 ntBASIC23.3■■□□□ 1.32
ERBB3P21860 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ERBB3P21860 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC23.3■■□□□ 1.32
ERBB3P21860 SMN2-210ENST00000511812 867 ntTSL 2 BASIC23.3■■□□□ 1.32
ERBB3P21860 AP000344.2-201ENST00000512987 629 ntBASIC23.3■■□□□ 1.32
ERBB3P21860 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC23.3■■□□□ 1.32
ERBB3P21860 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC23.3■■□□□ 1.32
ERBB3P21860 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ERBB3P21860 CITED2-204ENST00000618718 901 ntTSL 2 BASIC23.3■■□□□ 1.32
ERBB3P21860 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ERBB3P21860 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms