Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC2P18074 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.34■□□□□ 0.53
ERCC2P18074 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC2P18074 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.34■□□□□ 0.53
ERCC2P18074 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC2P18074 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC2P18074 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.33■□□□□ 0.53
ERCC2P18074 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ERCC2P18074 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ERCC2P18074 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.33■□□□□ 0.53
ERCC2P18074 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ERCC2P18074 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.33■□□□□ 0.53
ERCC2P18074 AC090340.1-201ENST00000620778 4980 ntBASIC18.33■□□□□ 0.53
ERCC2P18074 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ERCC2P18074 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.33■□□□□ 0.52
ERCC2P18074 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC2P18074 AL355312.1-201ENST00000407115 2176 ntBASIC18.33■□□□□ 0.52
ERCC2P18074 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC2P18074 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC2P18074 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ERCC2P18074 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ERCC2P18074 AC096633.1-201ENST00000422446 749 ntBASIC18.33■□□□□ 0.52
ERCC2P18074 AC091607.1-201ENST00000490318 1060 ntBASIC18.33■□□□□ 0.52
ERCC2P18074 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC2P18074 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.33■□□□□ 0.52
ERCC2P18074 AP002414.4-201ENST00000589764 1148 ntBASIC18.33■□□□□ 0.52
ERCC2P18074 AC005336.2-201ENST00000593183 939 ntBASIC18.33■□□□□ 0.52
ERCC2P18074 AC069148.1-201ENST00000608741 768 ntBASIC18.33■□□□□ 0.52
ERCC2P18074 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC2P18074 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ERCC2P18074 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.33■□□□□ 0.52
ERCC2P18074 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC2P18074 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC2P18074 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ERCC2P18074 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ERCC2P18074 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ERCC2P18074 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.32■□□□□ 0.52
ERCC2P18074 AC097374.2-201ENST00000618617 1306 ntBASIC18.32■□□□□ 0.52
ERCC2P18074 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ERCC2P18074 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.32■□□□□ 0.52
ERCC2P18074 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ERCC2P18074 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.32■□□□□ 0.52
ERCC2P18074 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.32■□□□□ 0.52
ERCC2P18074 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.32■□□□□ 0.52
ERCC2P18074 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.32■□□□□ 0.52
ERCC2P18074 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.32■□□□□ 0.52
ERCC2P18074 TPSP2-201ENST00000561760 610 ntBASIC18.32■□□□□ 0.52
ERCC2P18074 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ERCC2P18074 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.32■□□□□ 0.52
ERCC2P18074 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.32■□□□□ 0.52
ERCC2P18074 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.32■□□□□ 0.52
ERCC2P18074 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.32■□□□□ 0.52
ERCC2P18074 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.32■□□□□ 0.52
ERCC2P18074 LINC00896-202ENST00000609602 2128 ntBASIC18.32■□□□□ 0.52
ERCC2P18074 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.32■□□□□ 0.52
ERCC2P18074 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ERCC2P18074 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
ERCC2P18074 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC2P18074 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ERCC2P18074 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.31■□□□□ 0.52
ERCC2P18074 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ERCC2P18074 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ERCC2P18074 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 AC246785.2-201ENST00000432512 513 ntBASIC18.31■□□□□ 0.52
ERCC2P18074 DRAXINP1-201ENST00000437611 948 ntBASIC18.31■□□□□ 0.52
ERCC2P18074 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.31■□□□□ 0.52
ERCC2P18074 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.31■□□□□ 0.52
ERCC2P18074 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.31■□□□□ 0.52
ERCC2P18074 AP005901.3-202ENST00000581653 237 ntBASIC18.31■□□□□ 0.52
ERCC2P18074 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.31■□□□□ 0.52
ERCC2P18074 NPAP1P7-201ENST00000613027 823 ntBASIC18.31■□□□□ 0.52
ERCC2P18074 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.31■□□□□ 0.52
ERCC2P18074 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.31■□□□□ 0.52
ERCC2P18074 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ERCC2P18074 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC2P18074 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ERCC2P18074 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms