Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
BMP3P12645 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.5■□□□□ 0.87
BMP3P12645 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
BMP3P12645 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
BMP3P12645 HLA-J-201ENST00000462773 1622 ntBASIC20.5■□□□□ 0.87
BMP3P12645 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
BMP3P12645 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.5■□□□□ 0.87
BMP3P12645 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.5■□□□□ 0.87
BMP3P12645 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.5■□□□□ 0.87
BMP3P12645 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.5■□□□□ 0.87
BMP3P12645 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.5■□□□□ 0.87
BMP3P12645 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.5■□□□□ 0.87
BMP3P12645 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.5■□□□□ 0.87
BMP3P12645 AC107918.4-202ENST00000641623 219 ntBASIC20.5■□□□□ 0.87
BMP3P12645 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
BMP3P12645 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.5■□□□□ 0.87
BMP3P12645 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.5■□□□□ 0.87
BMP3P12645 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
BMP3P12645 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
BMP3P12645 AC004817.3-201ENST00000602957 2129 ntBASIC20.5■□□□□ 0.87
BMP3P12645 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BMP3P12645 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
BMP3P12645 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BMP3P12645 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BMP3P12645 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BMP3P12645 FLJ13224-201ENST00000313737 1514 ntBASIC20.49■□□□□ 0.87
BMP3P12645 BX276092.7-203ENST00000637198 1536 ntBASIC20.49■□□□□ 0.87
BMP3P12645 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.49■□□□□ 0.87
BMP3P12645 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
BMP3P12645 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.49■□□□□ 0.87
BMP3P12645 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
BMP3P12645 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
BMP3P12645 RPL13AP23-201ENST00000480739 586 ntBASIC20.49■□□□□ 0.87
BMP3P12645 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.49■□□□□ 0.87
BMP3P12645 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.49■□□□□ 0.87
BMP3P12645 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.49■□□□□ 0.87
BMP3P12645 AC019129.2-201ENST00000609837 1235 ntBASIC20.49■□□□□ 0.87
BMP3P12645 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BMP3P12645 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BMP3P12645 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BMP3P12645 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.49■□□□□ 0.87
BMP3P12645 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BMP3P12645 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BMP3P12645 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BMP3P12645 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.49■□□□□ 0.87
BMP3P12645 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BMP3P12645 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.48■□□□□ 0.87
BMP3P12645 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
BMP3P12645 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BMP3P12645 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.48■□□□□ 0.87
BMP3P12645 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.48■□□□□ 0.87
BMP3P12645 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.48■□□□□ 0.87
BMP3P12645 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
BMP3P12645 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.48■□□□□ 0.87
BMP3P12645 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BMP3P12645 MIR574-201ENST00000385209 96 ntBASIC20.48■□□□□ 0.87
BMP3P12645 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.48■□□□□ 0.87
BMP3P12645 PRYP5-201ENST00000451909 266 ntBASIC20.48■□□□□ 0.87
BMP3P12645 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.48■□□□□ 0.87
BMP3P12645 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.48■□□□□ 0.87
BMP3P12645 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BMP3P12645 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.48■□□□□ 0.87
BMP3P12645 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.48■□□□□ 0.87
BMP3P12645 AC106730.1-201ENST00000566722 1090 ntBASIC20.48■□□□□ 0.87
BMP3P12645 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BMP3P12645 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.48■□□□□ 0.87
BMP3P12645 AC008735.5-201ENST00000623544 497 ntBASIC20.48■□□□□ 0.87
BMP3P12645 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.48■□□□□ 0.87
BMP3P12645 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.48■□□□□ 0.87
BMP3P12645 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
BMP3P12645 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BMP3P12645 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
BMP3P12645 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BMP3P12645 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.48■□□□□ 0.87
BMP3P12645 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
BMP3P12645 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BMP3P12645 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BMP3P12645 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
BMP3P12645 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BMP3P12645 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BMP3P12645 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.47■□□□□ 0.87
BMP3P12645 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.47■□□□□ 0.87
BMP3P12645 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.47■□□□□ 0.87
BMP3P12645 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.47■□□□□ 0.87
BMP3P12645 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BMP3P12645 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.47■□□□□ 0.87
BMP3P12645 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms