Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
EPB41P11171 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPB41P11171 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.58■□□□□ 0.72
EPB41P11171 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPB41P11171 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.58■□□□□ 0.72
EPB41P11171 AL671277.2-201ENST00000458060 996 ntBASIC19.58■□□□□ 0.72
EPB41P11171 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.58■□□□□ 0.72
EPB41P11171 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.58■□□□□ 0.72
EPB41P11171 AC083849.1-201ENST00000615227 514 ntBASIC19.58■□□□□ 0.72
EPB41P11171 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
EPB41P11171 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EPB41P11171 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPB41P11171 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EPB41P11171 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EPB41P11171 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EPB41P11171 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
EPB41P11171 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.58■□□□□ 0.72
EPB41P11171 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EPB41P11171 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
EPB41P11171 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPB41P11171 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPB41P11171 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.57■□□□□ 0.72
EPB41P11171 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPB41P11171 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.57■□□□□ 0.72
EPB41P11171 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.57■□□□□ 0.72
EPB41P11171 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.57■□□□□ 0.72
EPB41P11171 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPB41P11171 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.57■□□□□ 0.72
EPB41P11171 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.57■□□□□ 0.72
EPB41P11171 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.57■□□□□ 0.72
EPB41P11171 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
EPB41P11171 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.57■□□□□ 0.72
EPB41P11171 AC009053.2-201ENST00000563701 2365 ntBASIC19.57■□□□□ 0.72
EPB41P11171 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
EPB41P11171 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPB41P11171 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EPB41P11171 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EPB41P11171 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.56■□□□□ 0.72
EPB41P11171 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPB41P11171 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.56■□□□□ 0.72
EPB41P11171 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPB41P11171 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPB41P11171 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPB41P11171 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.56■□□□□ 0.72
EPB41P11171 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPB41P11171 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPB41P11171 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPB41P11171 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.56■□□□□ 0.72
EPB41P11171 AC005332.3-201ENST00000589904 676 ntBASIC19.56■□□□□ 0.72
EPB41P11171 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.56■□□□□ 0.72
EPB41P11171 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
EPB41P11171 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPB41P11171 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
EPB41P11171 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPB41P11171 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EPB41P11171 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EPB41P11171 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.55■□□□□ 0.72
EPB41P11171 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
EPB41P11171 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.55■□□□□ 0.72
EPB41P11171 SPDYE13P-201ENST00000445314 798 ntBASIC19.55■□□□□ 0.72
EPB41P11171 KRT18P21-201ENST00000515767 1272 ntBASIC19.55■□□□□ 0.72
EPB41P11171 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.55■□□□□ 0.72
EPB41P11171 AL390719.2-201ENST00000606993 987 ntBASIC19.55■□□□□ 0.72
EPB41P11171 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.55■□□□□ 0.72
EPB41P11171 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.55■□□□□ 0.72
EPB41P11171 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EPB41P11171 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
EPB41P11171 KRT8P47-201ENST00000604727 1398 ntBASIC19.55■□□□□ 0.72
EPB41P11171 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EPB41P11171 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EPB41P11171 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
EPB41P11171 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EPB41P11171 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
EPB41P11171 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.54■□□□□ 0.72
EPB41P11171 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
EPB41P11171 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EPB41P11171 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EPB41P11171 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.54■□□□□ 0.72
EPB41P11171 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.54■□□□□ 0.72
EPB41P11171 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.54■□□□□ 0.72
EPB41P11171 AC112698.1-201ENST00000510299 916 ntBASIC19.54■□□□□ 0.72
EPB41P11171 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EPB41P11171 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
EPB41P11171 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms