Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SFTPBP07988 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.52■□□□□ 0.07
SFTPBP07988 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SFTPBP07988 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.51■□□□□ 0.07
SFTPBP07988 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
SFTPBP07988 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SFTPBP07988 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.51■□□□□ 0.07
SFTPBP07988 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 LINC01126-201ENST00000623515 1646 ntBASIC15.51■□□□□ 0.07
SFTPBP07988 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.51■□□□□ 0.07
SFTPBP07988 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SFTPBP07988 AK4P3-201ENST00000418260 669 ntBASIC15.51■□□□□ 0.07
SFTPBP07988 AC117947.1-201ENST00000427448 529 ntBASIC15.51■□□□□ 0.07
SFTPBP07988 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.51■□□□□ 0.07
SFTPBP07988 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 AC139887.4-201ENST00000607877 719 ntBASIC15.51■□□□□ 0.07
SFTPBP07988 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SFTPBP07988 AC112497.1-201ENST00000624824 639 ntBASIC15.51■□□□□ 0.07
SFTPBP07988 AL590326.2-201ENST00000625139 305 ntBASIC15.51■□□□□ 0.07
SFTPBP07988 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
SFTPBP07988 AC141257.4-201ENST00000634557 245 ntBASIC15.51■□□□□ 0.07
SFTPBP07988 AC136944.6-201ENST00000634818 245 ntBASIC15.51■□□□□ 0.07
SFTPBP07988 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.51■□□□□ 0.07
SFTPBP07988 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
SFTPBP07988 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SFTPBP07988 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SFTPBP07988 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SFTPBP07988 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.5■□□□□ 0.07
SFTPBP07988 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SFTPBP07988 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SFTPBP07988 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SFTPBP07988 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.5■□□□□ 0.07
SFTPBP07988 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.5■□□□□ 0.07
SFTPBP07988 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.5■□□□□ 0.07
SFTPBP07988 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.5■□□□□ 0.07
SFTPBP07988 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.5■□□□□ 0.07
SFTPBP07988 AC104390.1-201ENST00000555663 520 ntBASIC15.5■□□□□ 0.07
SFTPBP07988 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.5■□□□□ 0.07
SFTPBP07988 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.5■□□□□ 0.07
SFTPBP07988 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.5■□□□□ 0.07
SFTPBP07988 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SFTPBP07988 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.5■□□□□ 0.07
SFTPBP07988 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SFTPBP07988 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.5■□□□□ 0.07
SFTPBP07988 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SFTPBP07988 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SFTPBP07988 AL139384.1-201ENST00000612143 3047 ntBASIC15.5■□□□□ 0.07
SFTPBP07988 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SFTPBP07988 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.5■□□□□ 0.07
SFTPBP07988 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.5■□□□□ 0.07
SFTPBP07988 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SFTPBP07988 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SFTPBP07988 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SFTPBP07988 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SFTPBP07988 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SFTPBP07988 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SFTPBP07988 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SFTPBP07988 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms