Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
P04436 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.27■□□□□ 0.2
P04436 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P04436 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
P04436 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.27■□□□□ 0.2
P04436 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P04436 AL160237.2-201ENST00000556165 472 ntBASIC16.27■□□□□ 0.2
P04436 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.27■□□□□ 0.2
P04436 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.27■□□□□ 0.2
P04436 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.27■□□□□ 0.2
P04436 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.27■□□□□ 0.2
P04436 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
P04436 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.27■□□□□ 0.2
P04436 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
P04436 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
P04436 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P04436 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P04436 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.27■□□□□ 0.19
P04436 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
P04436 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.27■□□□□ 0.19
P04436 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
P04436 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P04436 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P04436 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.27■□□□□ 0.19
P04436 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.27■□□□□ 0.19
P04436 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
P04436 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
P04436 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
P04436 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.26■□□□□ 0.19
P04436 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.26■□□□□ 0.19
P04436 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.26■□□□□ 0.19
P04436 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.26■□□□□ 0.19
P04436 AC079781.3-201ENST00000449110 356 ntBASIC16.26■□□□□ 0.19
P04436 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.26■□□□□ 0.19
P04436 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
P04436 AC008608.2-201ENST00000606089 416 ntBASIC16.26■□□□□ 0.19
P04436 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.26■□□□□ 0.19
P04436 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.26■□□□□ 0.19
P04436 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 KRT8P10-201ENST00000450021 1447 ntBASIC16.26■□□□□ 0.19
P04436 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.26■□□□□ 0.19
P04436 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.26■□□□□ 0.19
P04436 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.26■□□□□ 0.19
P04436 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
P04436 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P04436 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
P04436 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.25■□□□□ 0.19
P04436 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
P04436 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
P04436 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.25■□□□□ 0.19
P04436 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.25■□□□□ 0.19
P04436 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 RBM17P3-201ENST00000417687 1192 ntBASIC16.25■□□□□ 0.19
P04436 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.25■□□□□ 0.19
P04436 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.25■□□□□ 0.19
P04436 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.25■□□□□ 0.19
P04436 AF238378.1-201ENST00000526806 358 ntBASIC16.25■□□□□ 0.19
P04436 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.25■□□□□ 0.19
P04436 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.25■□□□□ 0.19
P04436 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.25■□□□□ 0.19
P04436 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
P04436 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.25■□□□□ 0.19
P04436 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.25■□□□□ 0.19
P04436 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.25■□□□□ 0.19
P04436 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.25■□□□□ 0.19
P04436 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.25■□□□□ 0.19
P04436 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04436 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
P04436 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms