Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD74P04233 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CD74P04233 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD74P04233 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15□□□□□ -0.01
CD74P04233 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15□□□□□ -0.01
CD74P04233 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15□□□□□ -0.01
CD74P04233 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CD74P04233 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CD74P04233 MST1L-201ENST00000442552 2185 ntBASIC15□□□□□ -0.01
CD74P04233 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
CD74P04233 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.99□□□□□ -0.01
CD74P04233 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.99□□□□□ -0.01
CD74P04233 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.99□□□□□ -0.01
CD74P04233 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 AC009949.1-201ENST00000623048 1830 ntBASIC14.99□□□□□ -0.01
CD74P04233 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CD74P04233 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.99□□□□□ -0.01
CD74P04233 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CD74P04233 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 AL596257.1-201ENST00000641463 2694 ntBASIC14.99□□□□□ -0.01
CD74P04233 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.99□□□□□ -0.01
CD74P04233 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.99□□□□□ -0.01
CD74P04233 DDX43P3-201ENST00000441064 443 ntBASIC14.99□□□□□ -0.01
CD74P04233 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.99□□□□□ -0.01
CD74P04233 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.99□□□□□ -0.01
CD74P04233 AC104390.1-201ENST00000555663 520 ntBASIC14.99□□□□□ -0.01
CD74P04233 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.99□□□□□ -0.01
CD74P04233 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.99□□□□□ -0.01
CD74P04233 AC073195.1-201ENST00000607241 877 ntBASIC14.99□□□□□ -0.01
CD74P04233 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CD74P04233 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.99□□□□□ -0.01
CD74P04233 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CD74P04233 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CD74P04233 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.99□□□□□ -0.01
CD74P04233 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD74P04233 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.99□□□□□ -0.01
CD74P04233 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.98□□□□□ -0.01
CD74P04233 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CD74P04233 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.98□□□□□ -0.01
CD74P04233 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.98□□□□□ -0.01
CD74P04233 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CD74P04233 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 AC116353.5-201ENST00000638148 1699 ntBASIC14.98□□□□□ -0.01
CD74P04233 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CD74P04233 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.98□□□□□ -0.01
CD74P04233 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.98□□□□□ -0.01
CD74P04233 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.98□□□□□ -0.01
CD74P04233 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.98□□□□□ -0.01
CD74P04233 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CD74P04233 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.98□□□□□ -0.01
CD74P04233 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CD74P04233 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CD74P04233 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CD74P04233 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CD74P04233 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.98□□□□□ -0.01
CD74P04233 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.98□□□□□ -0.01
CD74P04233 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CD74P04233 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD74P04233 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CD74P04233 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CD74P04233 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.97□□□□□ -0.01
CD74P04233 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD74P04233 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms