Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SOD2P04179 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOD2P04179 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOD2P04179 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOD2P04179 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOD2P04179 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SOD2P04179 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOD2P04179 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SOD2P04179 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.69■□□□□ 0.58
SOD2P04179 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOD2P04179 CRYGEP-201ENST00000412192 528 ntBASIC18.69■□□□□ 0.58
SOD2P04179 AC108073.2-201ENST00000464002 357 ntBASIC18.69■□□□□ 0.58
SOD2P04179 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.69■□□□□ 0.58
SOD2P04179 IGHV3-65-201ENST00000523210 341 ntBASIC18.69■□□□□ 0.58
SOD2P04179 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.69■□□□□ 0.58
SOD2P04179 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.69■□□□□ 0.58
SOD2P04179 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.69■□□□□ 0.58
SOD2P04179 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.69■□□□□ 0.58
SOD2P04179 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.69■□□□□ 0.58
SOD2P04179 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.69■□□□□ 0.58
SOD2P04179 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.69■□□□□ 0.58
SOD2P04179 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.69■□□□□ 0.58
SOD2P04179 AC135776.1-201ENST00000319817 2481 ntBASIC18.69■□□□□ 0.58
SOD2P04179 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOD2P04179 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOD2P04179 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SOD2P04179 AP000974.1-201ENST00000623909 2387 ntBASIC18.69■□□□□ 0.58
SOD2P04179 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.69■□□□□ 0.58
SOD2P04179 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SOD2P04179 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SOD2P04179 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SOD2P04179 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOD2P04179 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.68■□□□□ 0.58
SOD2P04179 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SOD2P04179 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOD2P04179 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SOD2P04179 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOD2P04179 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SOD2P04179 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SOD2P04179 AC009949.1-201ENST00000623048 1830 ntBASIC18.68■□□□□ 0.58
SOD2P04179 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOD2P04179 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.68■□□□□ 0.58
SOD2P04179 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.68■□□□□ 0.58
SOD2P04179 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOD2P04179 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SOD2P04179 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.68■□□□□ 0.58
SOD2P04179 RPS8P6-201ENST00000426177 609 ntBASIC18.68■□□□□ 0.58
SOD2P04179 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.68■□□□□ 0.58
SOD2P04179 RPS15P9-201ENST00000494093 319 ntBASIC18.68■□□□□ 0.58
SOD2P04179 STK19B-204ENST00000512515 211 ntBASIC18.68■□□□□ 0.58
SOD2P04179 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.68■□□□□ 0.58
SOD2P04179 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.68■□□□□ 0.58
SOD2P04179 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.68■□□□□ 0.58
SOD2P04179 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.68■□□□□ 0.58
SOD2P04179 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.68■□□□□ 0.58
SOD2P04179 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.68■□□□□ 0.58
SOD2P04179 AC008667.4-201ENST00000607370 168 ntBASIC18.68■□□□□ 0.58
SOD2P04179 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SOD2P04179 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.68■□□□□ 0.58
SOD2P04179 AC134684.3-201ENST00000641758 218 ntBASIC18.68■□□□□ 0.58
SOD2P04179 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOD2P04179 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOD2P04179 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.68■□□□□ 0.58
SOD2P04179 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.68■□□□□ 0.58
SOD2P04179 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SOD2P04179 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
SOD2P04179 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.68■□□□□ 0.58
SOD2P04179 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SOD2P04179 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SOD2P04179 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.67■□□□□ 0.58
SOD2P04179 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.67■□□□□ 0.58
SOD2P04179 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.67■□□□□ 0.58
SOD2P04179 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 MCCD1P2-201ENST00000423228 335 ntBASIC18.67■□□□□ 0.58
SOD2P04179 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.67■□□□□ 0.58
SOD2P04179 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 IGHV3-52-201ENST00000519770 353 ntBASIC18.67■□□□□ 0.58
SOD2P04179 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.67■□□□□ 0.58
SOD2P04179 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.67■□□□□ 0.58
SOD2P04179 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.67■□□□□ 0.58
SOD2P04179 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
SOD2P04179 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.67■□□□□ 0.58
SOD2P04179 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SOD2P04179 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.67■□□□□ 0.58
SOD2P04179 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SOD2P04179 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.67■□□□□ 0.58
SOD2P04179 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.67■□□□□ 0.58
SOD2P04179 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SOD2P04179 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms