Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC11.01□□□□□ -0.65
APOBP04114 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.01□□□□□ -0.65
APOBP04114 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.01□□□□□ -0.65
APOBP04114 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC11.01□□□□□ -0.65
APOBP04114 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
APOBP04114 BASP1P1-201ENST00000430708 665 ntBASIC11.01□□□□□ -0.65
APOBP04114 AC245100.3-201ENST00000441281 285 ntBASIC11.01□□□□□ -0.65
APOBP04114 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC11.01□□□□□ -0.65
APOBP04114 AC067863.1-201ENST00000494933 530 ntBASIC11.01□□□□□ -0.65
APOBP04114 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.01□□□□□ -0.65
APOBP04114 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.01□□□□□ -0.65
APOBP04114 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.01□□□□□ -0.65
APOBP04114 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
APOBP04114 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.01□□□□□ -0.65
APOBP04114 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.01□□□□□ -0.65
APOBP04114 TBC1D3P5-201ENST00000579401 1545 ntBASIC11.01□□□□□ -0.65
APOBP04114 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC11.01□□□□□ -0.65
APOBP04114 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
APOBP04114 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.01□□□□□ -0.65
APOBP04114 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
APOBP04114 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.01□□□□□ -0.65
APOBP04114 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.01□□□□□ -0.65
APOBP04114 AC069335.1-201ENST00000489972 472 ntBASIC11.01□□□□□ -0.65
APOBP04114 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.01□□□□□ -0.65
APOBP04114 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
APOBP04114 ANO7L1-203ENST00000602586 1720 ntBASIC11□□□□□ -0.65
APOBP04114 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11□□□□□ -0.65
APOBP04114 TFAMP1-201ENST00000412727 736 ntBASIC11□□□□□ -0.65
APOBP04114 CRB3P1-201ENST00000449338 276 ntBASIC11□□□□□ -0.65
APOBP04114 AC025678.2-201ENST00000562061 970 ntBASIC11□□□□□ -0.65
APOBP04114 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11□□□□□ -0.65
APOBP04114 LINC02560-201ENST00000596379 459 ntBASIC11□□□□□ -0.65
APOBP04114 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11□□□□□ -0.65
APOBP04114 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC11□□□□□ -0.65
APOBP04114 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC11□□□□□ -0.65
APOBP04114 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC11□□□□□ -0.65
APOBP04114 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11□□□□□ -0.65
APOBP04114 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11□□□□□ -0.65
APOBP04114 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11□□□□□ -0.65
APOBP04114 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
APOBP04114 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11□□□□□ -0.65
APOBP04114 AL132655.2-201ENST00000596276 594 ntBASIC11□□□□□ -0.65
APOBP04114 AL359881.2-201ENST00000602973 570 ntBASIC11□□□□□ -0.65
APOBP04114 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11□□□□□ -0.65
APOBP04114 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11□□□□□ -0.65
APOBP04114 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11□□□□□ -0.65
APOBP04114 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11□□□□□ -0.65
APOBP04114 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
APOBP04114 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC11□□□□□ -0.65
APOBP04114 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
APOBP04114 COBL-210ENST00000632460 1941 ntTSL 5 BASIC11□□□□□ -0.65
APOBP04114 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
APOBP04114 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11□□□□□ -0.65
APOBP04114 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11□□□□□ -0.65
APOBP04114 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 TREML5P-201ENST00000421694 576 ntBASIC11□□□□□ -0.65
APOBP04114 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11□□□□□ -0.65
APOBP04114 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11□□□□□ -0.65
APOBP04114 RNA5SP421-201ENST00000516864 134 ntBASIC11□□□□□ -0.65
APOBP04114 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11□□□□□ -0.65
APOBP04114 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC11□□□□□ -0.65
APOBP04114 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC11□□□□□ -0.65
APOBP04114 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
APOBP04114 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
APOBP04114 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
APOBP04114 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
APOBP04114 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms