Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CDKL5O76039 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL5O76039 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.73■□□□□ 0.91
CDKL5O76039 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDKL5O76039 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL5O76039 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL5O76039 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL5O76039 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.73■□□□□ 0.91
CDKL5O76039 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.73■□□□□ 0.91
CDKL5O76039 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.73■□□□□ 0.91
CDKL5O76039 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKL5O76039 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDKL5O76039 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.73■□□□□ 0.91
CDKL5O76039 AC090616.6-201ENST00000582640 721 ntBASIC20.73■□□□□ 0.91
CDKL5O76039 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
CDKL5O76039 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.73■□□□□ 0.91
CDKL5O76039 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CDKL5O76039 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDKL5O76039 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL5O76039 AL355312.1-201ENST00000407115 2176 ntBASIC20.73■□□□□ 0.91
CDKL5O76039 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDKL5O76039 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKL5O76039 AC133963.1-201ENST00000504166 1679 ntBASIC20.73■□□□□ 0.91
CDKL5O76039 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL5O76039 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL5O76039 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKL5O76039 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL5O76039 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKL5O76039 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.72■□□□□ 0.91
CDKL5O76039 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.72■□□□□ 0.91
CDKL5O76039 KRT8P26-201ENST00000534154 1276 ntBASIC20.72■□□□□ 0.91
CDKL5O76039 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.72■□□□□ 0.91
CDKL5O76039 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.72■□□□□ 0.91
CDKL5O76039 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 BX276092.7-203ENST00000637198 1536 ntBASIC20.72■□□□□ 0.91
CDKL5O76039 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDKL5O76039 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL5O76039 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDKL5O76039 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDKL5O76039 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CDKL5O76039 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.71■□□□□ 0.91
CDKL5O76039 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.71■□□□□ 0.91
CDKL5O76039 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CDKL5O76039 LINC01451-201ENST00000623792 534 ntBASIC20.71■□□□□ 0.91
CDKL5O76039 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.71■□□□□ 0.91
CDKL5O76039 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDKL5O76039 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL5O76039 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.7■□□□□ 0.9
CDKL5O76039 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.7■□□□□ 0.9
CDKL5O76039 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.7■□□□□ 0.9
CDKL5O76039 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.7■□□□□ 0.9
CDKL5O76039 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 AC087388.1-201ENST00000571370 1112 ntBASIC20.7■□□□□ 0.9
CDKL5O76039 AL592071.1-201ENST00000611956 408 ntBASIC20.7■□□□□ 0.9
CDKL5O76039 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.7■□□□□ 0.9
CDKL5O76039 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.7■□□□□ 0.9
CDKL5O76039 AC005332.1-201ENST00000577698 1310 ntBASIC20.7■□□□□ 0.9
CDKL5O76039 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.7■□□□□ 0.9
CDKL5O76039 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.7■□□□□ 0.9
CDKL5O76039 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL5O76039 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.69■□□□□ 0.9
CDKL5O76039 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms