Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLPXO76031 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.23■□□□□ 0.19
CLPXO76031 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLPXO76031 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.22■□□□□ 0.19
CLPXO76031 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.22■□□□□ 0.19
CLPXO76031 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLPXO76031 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 MYLKP1-201ENST00000509077 1580 ntBASIC16.22■□□□□ 0.19
CLPXO76031 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.22■□□□□ 0.19
CLPXO76031 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.22■□□□□ 0.19
CLPXO76031 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.22■□□□□ 0.19
CLPXO76031 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.22■□□□□ 0.19
CLPXO76031 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLPXO76031 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLPXO76031 TSPY23P-201ENST00000440136 739 ntBASIC16.22■□□□□ 0.19
CLPXO76031 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.22■□□□□ 0.19
CLPXO76031 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CLPXO76031 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLPXO76031 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.22■□□□□ 0.19
CLPXO76031 PHGDH-209ENST00000641074 1780 ntBASIC16.22■□□□□ 0.19
CLPXO76031 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CLPXO76031 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.22■□□□□ 0.19
CLPXO76031 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.22■□□□□ 0.19
CLPXO76031 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.22■□□□□ 0.19
CLPXO76031 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.22■□□□□ 0.19
CLPXO76031 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLPXO76031 AL357033.4-201ENST00000617703 1807 ntBASIC16.22■□□□□ 0.19
CLPXO76031 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.21■□□□□ 0.19
CLPXO76031 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CLPXO76031 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.21■□□□□ 0.19
CLPXO76031 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.21■□□□□ 0.19
CLPXO76031 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.21■□□□□ 0.19
CLPXO76031 MIR718-201ENST00000390190 70 ntBASIC16.21■□□□□ 0.19
CLPXO76031 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 KRT17P3-201ENST00000420566 1262 ntBASIC16.21■□□□□ 0.19
CLPXO76031 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.21■□□□□ 0.19
CLPXO76031 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.21■□□□□ 0.19
CLPXO76031 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.21■□□□□ 0.19
CLPXO76031 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLPXO76031 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.21■□□□□ 0.19
CLPXO76031 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.21■□□□□ 0.19
CLPXO76031 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.21■□□□□ 0.19
CLPXO76031 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CLPXO76031 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.21■□□□□ 0.19
CLPXO76031 AC005052.1-201ENST00000625181 2492 ntBASIC16.21■□□□□ 0.18
CLPXO76031 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.21■□□□□ 0.18
CLPXO76031 AC133963.1-201ENST00000504166 1679 ntBASIC16.21■□□□□ 0.18
CLPXO76031 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLPXO76031 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CLPXO76031 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.2■□□□□ 0.18
CLPXO76031 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.2■□□□□ 0.18
CLPXO76031 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.2■□□□□ 0.18
CLPXO76031 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CLPXO76031 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.2■□□□□ 0.18
CLPXO76031 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.2■□□□□ 0.18
CLPXO76031 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLPXO76031 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.2■□□□□ 0.18
CLPXO76031 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLPXO76031 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.2■□□□□ 0.18
CLPXO76031 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.2■□□□□ 0.18
CLPXO76031 AL121829.2-201ENST00000620908 328 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms