Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UPK1BO75841 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UPK1BO75841 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 AC144831.1-201ENST00000573312 2656 ntBASIC15.53■□□□□ 0.08
UPK1BO75841 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
UPK1BO75841 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
UPK1BO75841 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UPK1BO75841 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 AL356441.2-201ENST00000443009 864 ntBASIC15.53■□□□□ 0.08
UPK1BO75841 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.53■□□□□ 0.08
UPK1BO75841 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 AC005181.1-201ENST00000604782 1256 ntBASIC15.53■□□□□ 0.08
UPK1BO75841 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 LINC01451-201ENST00000623792 534 ntBASIC15.53■□□□□ 0.08
UPK1BO75841 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UPK1BO75841 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UPK1BO75841 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.53■□□□□ 0.08
UPK1BO75841 AC100803.2-201ENST00000562459 1963 ntBASIC15.53■□□□□ 0.08
UPK1BO75841 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UPK1BO75841 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 AC068338.2-201ENST00000563278 1430 ntBASIC15.52■□□□□ 0.08
UPK1BO75841 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.52■□□□□ 0.08
UPK1BO75841 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.52■□□□□ 0.08
UPK1BO75841 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 POU5F1P3-201ENST00000428824 1078 ntBASIC15.52■□□□□ 0.08
UPK1BO75841 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.52■□□□□ 0.08
UPK1BO75841 RAP2CP1-201ENST00000605103 478 ntBASIC15.52■□□□□ 0.08
UPK1BO75841 AL136967.2-201ENST00000623968 743 ntBASIC15.52■□□□□ 0.08
UPK1BO75841 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
UPK1BO75841 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UPK1BO75841 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.52■□□□□ 0.07
UPK1BO75841 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1BO75841 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.52■□□□□ 0.07
UPK1BO75841 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1BO75841 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.52■□□□□ 0.07
UPK1BO75841 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1BO75841 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1BO75841 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1BO75841 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.52■□□□□ 0.07
UPK1BO75841 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
UPK1BO75841 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.52■□□□□ 0.07
UPK1BO75841 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
UPK1BO75841 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1BO75841 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1BO75841 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UPK1BO75841 AC016396.2-201ENST00000562575 1417 ntBASIC15.51■□□□□ 0.07
UPK1BO75841 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
UPK1BO75841 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
UPK1BO75841 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.51■□□□□ 0.07
UPK1BO75841 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.51■□□□□ 0.07
UPK1BO75841 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UPK1BO75841 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UPK1BO75841 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms