Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GFRA3O60609 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GFRA3O60609 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GFRA3O60609 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GFRA3O60609 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
GFRA3O60609 AC079776.1-201ENST00000401540 1152 ntBASIC17.17■□□□□ 0.34
GFRA3O60609 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.17■□□□□ 0.34
GFRA3O60609 BCYRN1-201ENST00000418539 200 ntBASIC17.17■□□□□ 0.34
GFRA3O60609 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.17■□□□□ 0.34
GFRA3O60609 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.17■□□□□ 0.34
GFRA3O60609 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.17■□□□□ 0.34
GFRA3O60609 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GFRA3O60609 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
GFRA3O60609 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.17■□□□□ 0.34
GFRA3O60609 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GFRA3O60609 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GFRA3O60609 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
GFRA3O60609 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.17■□□□□ 0.34
GFRA3O60609 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GFRA3O60609 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GFRA3O60609 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
GFRA3O60609 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.17■□□□□ 0.34
GFRA3O60609 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GFRA3O60609 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.16■□□□□ 0.34
GFRA3O60609 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GFRA3O60609 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GFRA3O60609 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GFRA3O60609 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
GFRA3O60609 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GFRA3O60609 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
GFRA3O60609 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
GFRA3O60609 FAM86MP-201ENST00000340703 885 ntBASIC17.16■□□□□ 0.34
GFRA3O60609 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
GFRA3O60609 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
GFRA3O60609 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
GFRA3O60609 AC092506.1-202ENST00000401022 528 ntBASIC17.16■□□□□ 0.34
GFRA3O60609 KLF4P1-201ENST00000412782 1185 ntBASIC17.16■□□□□ 0.34
GFRA3O60609 AC096633.1-201ENST00000422446 749 ntBASIC17.16■□□□□ 0.34
GFRA3O60609 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GFRA3O60609 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.16■□□□□ 0.34
GFRA3O60609 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
GFRA3O60609 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GFRA3O60609 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.16■□□□□ 0.34
GFRA3O60609 RAB43P1-201ENST00000561790 589 ntBASIC17.16■□□□□ 0.34
GFRA3O60609 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.16■□□□□ 0.34
GFRA3O60609 IGHV3-72-202ENST00000621503 303 ntBASIC17.16■□□□□ 0.34
GFRA3O60609 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.16■□□□□ 0.34
GFRA3O60609 AL033527.4-201ENST00000641026 673 ntBASIC17.16■□□□□ 0.34
GFRA3O60609 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GFRA3O60609 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GFRA3O60609 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.16■□□□□ 0.34
GFRA3O60609 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.15■□□□□ 0.34
GFRA3O60609 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GFRA3O60609 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.15■□□□□ 0.34
GFRA3O60609 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
GFRA3O60609 SPDYE14P-201ENST00000442619 822 ntBASIC17.15■□□□□ 0.34
GFRA3O60609 SPTLC1P1-201ENST00000447199 261 ntBASIC17.15■□□□□ 0.34
GFRA3O60609 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.15■□□□□ 0.34
GFRA3O60609 AC092552.1-201ENST00000547243 906 ntBASIC17.15■□□□□ 0.34
GFRA3O60609 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
GFRA3O60609 AC243562.1-201ENST00000560672 389 ntBASIC17.15■□□□□ 0.34
GFRA3O60609 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.15■□□□□ 0.34
GFRA3O60609 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.15■□□□□ 0.34
GFRA3O60609 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.15■□□□□ 0.34
GFRA3O60609 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.15■□□□□ 0.34
GFRA3O60609 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GFRA3O60609 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GFRA3O60609 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GFRA3O60609 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
GFRA3O60609 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.15■□□□□ 0.34
GFRA3O60609 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GFRA3O60609 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
GFRA3O60609 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.14■□□□□ 0.34
GFRA3O60609 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.14■□□□□ 0.33
GFRA3O60609 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GFRA3O60609 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GFRA3O60609 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GFRA3O60609 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.14■□□□□ 0.33
GFRA3O60609 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GFRA3O60609 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.14■□□□□ 0.33
GFRA3O60609 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GFRA3O60609 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.14■□□□□ 0.33
GFRA3O60609 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GFRA3O60609 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
GFRA3O60609 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.14■□□□□ 0.33
GFRA3O60609 AC092933.1-201ENST00000393644 945 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms