Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.84□□□□□ -0.19
PDE6DO43924 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.84□□□□□ -0.19
PDE6DO43924 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDE6DO43924 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDE6DO43924 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.84□□□□□ -0.19
PDE6DO43924 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDE6DO43924 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.83□□□□□ -0.19
PDE6DO43924 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDE6DO43924 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDE6DO43924 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDE6DO43924 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PDE6DO43924 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.83□□□□□ -0.2
PDE6DO43924 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.83□□□□□ -0.2
PDE6DO43924 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PDE6DO43924 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.83□□□□□ -0.2
PDE6DO43924 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.83□□□□□ -0.2
PDE6DO43924 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
PDE6DO43924 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
PDE6DO43924 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.83□□□□□ -0.2
PDE6DO43924 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.83□□□□□ -0.2
PDE6DO43924 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.83□□□□□ -0.2
PDE6DO43924 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.83□□□□□ -0.2
PDE6DO43924 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.83□□□□□ -0.2
PDE6DO43924 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.83□□□□□ -0.2
PDE6DO43924 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.83□□□□□ -0.2
PDE6DO43924 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
PDE6DO43924 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 AL513477.1-201ENST00000602865 2407 ntBASIC13.83□□□□□ -0.2
PDE6DO43924 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 AC026691.1-201ENST00000602502 2017 ntBASIC13.83□□□□□ -0.2
PDE6DO43924 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDE6DO43924 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 AC068587.6-202ENST00000641839 5619 ntBASIC13.82□□□□□ -0.2
PDE6DO43924 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.82□□□□□ -0.2
PDE6DO43924 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PDE6DO43924 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 NBPF21P-201ENST00000425093 1451 ntBASIC13.82□□□□□ -0.2
PDE6DO43924 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PDE6DO43924 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
PDE6DO43924 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PDE6DO43924 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.82□□□□□ -0.2
PDE6DO43924 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 AF201337.1-201ENST00000520239 748 ntBASIC13.82□□□□□ -0.2
PDE6DO43924 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.82□□□□□ -0.2
PDE6DO43924 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.82□□□□□ -0.2
PDE6DO43924 AC092118.2-201ENST00000613495 667 ntBASIC13.82□□□□□ -0.2
PDE6DO43924 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.82□□□□□ -0.2
PDE6DO43924 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.82□□□□□ -0.2
PDE6DO43924 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.82□□□□□ -0.2
PDE6DO43924 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.82□□□□□ -0.2
PDE6DO43924 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
PDE6DO43924 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDE6DO43924 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
PDE6DO43924 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6DO43924 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6DO43924 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6DO43924 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
PDE6DO43924 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDE6DO43924 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms