Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 AC135776.1-201ENST00000319817 2481 ntBASIC17.04■□□□□ 0.32
DUX1O43812 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX1O43812 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DUX1O43812 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DUX1O43812 KRT18P13-201ENST00000400056 1290 ntBASIC17.04■□□□□ 0.32
DUX1O43812 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.04■□□□□ 0.32
DUX1O43812 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX1O43812 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.04■□□□□ 0.32
DUX1O43812 BX005266.1-201ENST00000473402 457 ntBASIC17.04■□□□□ 0.32
DUX1O43812 AC092910.1-201ENST00000482027 1129 ntBASIC17.04■□□□□ 0.32
DUX1O43812 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.04■□□□□ 0.32
DUX1O43812 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.04■□□□□ 0.32
DUX1O43812 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.04■□□□□ 0.32
DUX1O43812 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 AC107918.4-202ENST00000641623 219 ntBASIC17.04■□□□□ 0.32
DUX1O43812 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 AC098818.2-201ENST00000564925 2320 ntBASIC17.04■□□□□ 0.32
DUX1O43812 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX1O43812 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
DUX1O43812 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX1O43812 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX1O43812 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
DUX1O43812 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.03■□□□□ 0.32
DUX1O43812 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.03■□□□□ 0.32
DUX1O43812 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
DUX1O43812 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.03■□□□□ 0.32
DUX1O43812 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.03■□□□□ 0.32
DUX1O43812 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX1O43812 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.03■□□□□ 0.32
DUX1O43812 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.03■□□□□ 0.32
DUX1O43812 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.03■□□□□ 0.32
DUX1O43812 AC073592.4-201ENST00000623827 446 ntBASIC17.03■□□□□ 0.32
DUX1O43812 AC073592.5-201ENST00000624854 528 ntBASIC17.03■□□□□ 0.32
DUX1O43812 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.03■□□□□ 0.32
DUX1O43812 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX1O43812 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX1O43812 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
DUX1O43812 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.03■□□□□ 0.32
DUX1O43812 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
DUX1O43812 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.03■□□□□ 0.32
DUX1O43812 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
DUX1O43812 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DUX1O43812 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.03■□□□□ 0.32
DUX1O43812 SIGLEC16-201ENST00000599858 1437 ntBASIC17.03■□□□□ 0.32
DUX1O43812 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.03■□□□□ 0.32
DUX1O43812 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX1O43812 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX1O43812 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX1O43812 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.02■□□□□ 0.32
DUX1O43812 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.02■□□□□ 0.32
DUX1O43812 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.02■□□□□ 0.32
DUX1O43812 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DUX1O43812 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX1O43812 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DUX1O43812 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX1O43812 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
DUX1O43812 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
DUX1O43812 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX1O43812 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DUX1O43812 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
DUX1O43812 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.02■□□□□ 0.32
DUX1O43812 SPDYE21P-201ENST00000413323 827 ntBASIC17.02■□□□□ 0.32
DUX1O43812 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.02■□□□□ 0.32
DUX1O43812 AC098831.1-202ENST00000438821 336 ntBASIC17.02■□□□□ 0.32
DUX1O43812 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.02■□□□□ 0.32
DUX1O43812 POLD2P1-201ENST00000511220 997 ntBASIC17.02■□□□□ 0.32
DUX1O43812 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.02■□□□□ 0.32
DUX1O43812 AC105339.3-201ENST00000560043 636 ntBASIC17.02■□□□□ 0.32
DUX1O43812 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.02■□□□□ 0.32
DUX1O43812 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.02■□□□□ 0.32
DUX1O43812 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DUX1O43812 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.02■□□□□ 0.32
DUX1O43812 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms