Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 RPS2P1-201ENST00000434010 821 ntBASIC14.32□□□□□ -0.12
HOXA3O43365 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.32□□□□□ -0.12
HOXA3O43365 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HOXA3O43365 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXA3O43365 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.32□□□□□ -0.12
HOXA3O43365 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 AC116407.3-201ENST00000623905 1129 ntBASIC14.32□□□□□ -0.12
HOXA3O43365 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXA3O43365 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HOXA3O43365 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXA3O43365 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HOXA3O43365 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
HOXA3O43365 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXA3O43365 ZNF259P1-201ENST00000407656 1365 ntBASIC14.32□□□□□ -0.12
HOXA3O43365 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HOXA3O43365 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA3O43365 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXA3O43365 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA3O43365 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA3O43365 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA3O43365 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HOXA3O43365 KRT18P13-201ENST00000400056 1290 ntBASIC14.31□□□□□ -0.12
HOXA3O43365 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA3O43365 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXA3O43365 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.31□□□□□ -0.12
HOXA3O43365 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 POLD2P1-201ENST00000511220 997 ntBASIC14.31□□□□□ -0.12
HOXA3O43365 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXA3O43365 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXA3O43365 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA3O43365 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA3O43365 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA3O43365 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 TERC-201ENST00000602385 541 ntBASIC14.31□□□□□ -0.12
HOXA3O43365 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.31□□□□□ -0.12
HOXA3O43365 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HOXA3O43365 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HOXA3O43365 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA3O43365 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
HOXA3O43365 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA3O43365 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
HOXA3O43365 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA3O43365 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.31□□□□□ -0.12
HOXA3O43365 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXA3O43365 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXA3O43365 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA3O43365 AC132938.6-201ENST00000623828 1655 ntBASIC14.3□□□□□ -0.12
HOXA3O43365 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA3O43365 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA3O43365 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA3O43365 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA3O43365 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA3O43365 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA3O43365 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA3O43365 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HOXA3O43365 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA3O43365 FAM220CP-201ENST00000395253 831 ntBASIC14.3□□□□□ -0.12
HOXA3O43365 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.3□□□□□ -0.12
HOXA3O43365 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXA3O43365 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXA3O43365 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA3O43365 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA3O43365 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXA3O43365 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.3□□□□□ -0.12
HOXA3O43365 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXA3O43365 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HOXA3O43365 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms