Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.48■□□□□ 0.71
CLDN3O15551 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN3O15551 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN3O15551 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN3O15551 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CLDN3O15551 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN3O15551 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN3O15551 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN3O15551 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN3O15551 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN3O15551 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CLDN3O15551 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN3O15551 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLDN3O15551 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN3O15551 PCDHB18P-201ENST00000524813 2368 ntBASIC19.48■□□□□ 0.71
CLDN3O15551 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN3O15551 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN3O15551 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN3O15551 TP73-AS1-210ENST00000637775 1455 ntBASIC19.48■□□□□ 0.71
CLDN3O15551 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN3O15551 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 NUS1P2-201ENST00000417358 873 ntBASIC19.47■□□□□ 0.71
CLDN3O15551 KRT16P4-201ENST00000453883 522 ntBASIC19.47■□□□□ 0.71
CLDN3O15551 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN3O15551 KRT18P31-201ENST00000506277 1292 ntBASIC19.47■□□□□ 0.71
CLDN3O15551 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.47■□□□□ 0.71
CLDN3O15551 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN3O15551 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CLDN3O15551 AC091304.2-201ENST00000564639 760 ntBASIC19.47■□□□□ 0.71
CLDN3O15551 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.47■□□□□ 0.71
CLDN3O15551 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.47■□□□□ 0.71
CLDN3O15551 AC116407.2-201ENST00000613639 860 ntBASIC19.47■□□□□ 0.71
CLDN3O15551 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.47■□□□□ 0.71
CLDN3O15551 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN3O15551 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN3O15551 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN3O15551 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN3O15551 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN3O15551 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN3O15551 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLDN3O15551 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN3O15551 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 KRT18P55-202ENST00000578578 1546 ntBASIC19.46■□□□□ 0.71
CLDN3O15551 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN3O15551 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN3O15551 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN3O15551 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CLDN3O15551 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN3O15551 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN3O15551 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLDN3O15551 AC096633.1-201ENST00000422446 749 ntBASIC19.46■□□□□ 0.71
CLDN3O15551 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN3O15551 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN3O15551 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN3O15551 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN3O15551 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLDN3O15551 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN3O15551 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN3O15551 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLDN3O15551 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN3O15551 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN3O15551 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN3O15551 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLDN3O15551 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN3O15551 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN3O15551 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN3O15551 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN3O15551 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN3O15551 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN3O15551 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN3O15551 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLDN3O15551 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN3O15551 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
CLDN3O15551 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.45■□□□□ 0.7
CLDN3O15551 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.45■□□□□ 0.7
CLDN3O15551 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN3O15551 AL732292.2-201ENST00000609649 430 ntBASIC19.45■□□□□ 0.7
CLDN3O15551 AC114341.1-201ENST00000618070 349 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms