Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL21O00585 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.1
CCL21O00585 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CCL21O00585 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL21O00585 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL21O00585 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL21O00585 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCL21O00585 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL21O00585 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL21O00585 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL21O00585 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL21O00585 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL21O00585 AL645939.2-201ENST00000427340 991 ntBASIC15.64■□□□□ 0.09
CCL21O00585 CEND1P1-201ENST00000451006 455 ntBASIC15.64■□□□□ 0.09
CCL21O00585 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL21O00585 RPS15P9-201ENST00000494093 319 ntBASIC15.64■□□□□ 0.09
CCL21O00585 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.64■□□□□ 0.09
CCL21O00585 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.64■□□□□ 0.09
CCL21O00585 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.64■□□□□ 0.09
CCL21O00585 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL21O00585 AL513190.1-201ENST00000621254 727 ntBASIC15.64■□□□□ 0.09
CCL21O00585 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL21O00585 AC004790.2-201ENST00000623588 572 ntBASIC15.64■□□□□ 0.09
CCL21O00585 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL21O00585 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL21O00585 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCL21O00585 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCL21O00585 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL21O00585 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCL21O00585 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL21O00585 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL21O00585 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CCL21O00585 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL21O00585 HTR7P1-202ENST00000624664 4411 ntBASIC15.63■□□□□ 0.09
CCL21O00585 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCL21O00585 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CCL21O00585 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.63■□□□□ 0.09
CCL21O00585 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.63■□□□□ 0.09
CCL21O00585 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CCL21O00585 KLF4P1-201ENST00000412782 1185 ntBASIC15.63■□□□□ 0.09
CCL21O00585 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.63■□□□□ 0.09
CCL21O00585 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CCL21O00585 MKNK2P1-201ENST00000437526 628 ntBASIC15.63■□□□□ 0.09
CCL21O00585 PRSS29P-201ENST00000440800 595 ntBASIC15.63■□□□□ 0.09
CCL21O00585 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.63■□□□□ 0.09
CCL21O00585 HCG4B-203ENST00000450128 991 ntBASIC15.63■□□□□ 0.09
CCL21O00585 SIGLEC30P-201ENST00000455569 941 ntBASIC15.63■□□□□ 0.09
CCL21O00585 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CCL21O00585 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.63■□□□□ 0.09
CCL21O00585 AP002472.1-201ENST00000577490 586 ntBASIC15.63■□□□□ 0.09
CCL21O00585 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.63■□□□□ 0.09
CCL21O00585 MIR3197-201ENST00000582241 73 ntBASIC15.63■□□□□ 0.09
CCL21O00585 AC008667.4-201ENST00000607370 168 ntBASIC15.63■□□□□ 0.09
CCL21O00585 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCL21O00585 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.63■□□□□ 0.09
CCL21O00585 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCL21O00585 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 GPR89P-201ENST00000407924 1495 ntBASIC15.63■□□□□ 0.09
CCL21O00585 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL21O00585 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.63■□□□□ 0.09
CCL21O00585 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCL21O00585 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCL21O00585 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCL21O00585 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.62■□□□□ 0.09
CCL21O00585 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCL21O00585 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCL21O00585 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL21O00585 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CCL21O00585 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCL21O00585 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.62■□□□□ 0.09
CCL21O00585 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.62■□□□□ 0.09
CCL21O00585 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.62■□□□□ 0.09
CCL21O00585 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CCL21O00585 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.62■□□□□ 0.09
CCL21O00585 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.62■□□□□ 0.09
CCL21O00585 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.62■□□□□ 0.09
CCL21O00585 IGHV3-65-201ENST00000523210 341 ntBASIC15.62■□□□□ 0.09
CCL21O00585 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.62■□□□□ 0.09
CCL21O00585 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.62■□□□□ 0.09
CCL21O00585 AL353593.2-201ENST00000602529 1483 ntBASIC15.62■□□□□ 0.09
CCL21O00585 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCL21O00585 ELL2P1-201ENST00000413990 1906 ntBASIC15.62■□□□□ 0.09
CCL21O00585 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL21O00585 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL21O00585 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CCL21O00585 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCL21O00585 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CCL21O00585 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCL21O00585 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms