Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC005521.1-201ENST00000393351 872 ntBASIC18.03■□□□□ 0.48
AP3B1O00203 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.03■□□□□ 0.48
AP3B1O00203 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.03■□□□□ 0.48
AP3B1O00203 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.03■□□□□ 0.48
AP3B1O00203 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.03■□□□□ 0.48
AP3B1O00203 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.03■□□□□ 0.48
AP3B1O00203 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.03■□□□□ 0.48
AP3B1O00203 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 GPR32P1-201ENST00000601788 811 ntBASIC18.03■□□□□ 0.48
AP3B1O00203 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.03■□□□□ 0.48
AP3B1O00203 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 AL353692.3-201ENST00000407031 1396 ntBASIC18.03■□□□□ 0.48
AP3B1O00203 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
AP3B1O00203 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3B1O00203 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
AP3B1O00203 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
AP3B1O00203 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
AP3B1O00203 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.02■□□□□ 0.48
AP3B1O00203 HBZP1-201ENST00000354915 429 ntBASIC18.02■□□□□ 0.48
AP3B1O00203 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
AP3B1O00203 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
AP3B1O00203 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
AP3B1O00203 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.02■□□□□ 0.48
AP3B1O00203 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.02■□□□□ 0.48
AP3B1O00203 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
AP3B1O00203 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3B1O00203 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP3B1O00203 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP3B1O00203 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP3B1O00203 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
AP3B1O00203 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 AL023806.1-201ENST00000603994 1649 ntBASIC18.01■□□□□ 0.47
AP3B1O00203 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.01■□□□□ 0.47
AP3B1O00203 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 AK4P3-201ENST00000418260 669 ntBASIC18.01■□□□□ 0.47
AP3B1O00203 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.01■□□□□ 0.47
AP3B1O00203 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.01■□□□□ 0.47
AP3B1O00203 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.01■□□□□ 0.47
AP3B1O00203 AC092647.4-201ENST00000457211 535 ntBASIC18.01■□□□□ 0.47
AP3B1O00203 AL359075.1-203ENST00000462729 1002 ntBASIC18.01■□□□□ 0.47
AP3B1O00203 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
AP3B1O00203 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.01■□□□□ 0.47
AP3B1O00203 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
AP3B1O00203 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
AP3B1O00203 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
AP3B1O00203 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.01■□□□□ 0.47
AP3B1O00203 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 KRT8P47-201ENST00000604727 1398 ntBASIC18.01■□□□□ 0.47
AP3B1O00203 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.01■□□□□ 0.47
AP3B1O00203 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.01■□□□□ 0.47
AP3B1O00203 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP3B1O00203 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18■□□□□ 0.47
AP3B1O00203 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18■□□□□ 0.47
AP3B1O00203 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18■□□□□ 0.47
AP3B1O00203 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
AP3B1O00203 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
AP3B1O00203 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
AP3B1O00203 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18■□□□□ 0.47
AP3B1O00203 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18■□□□□ 0.47
AP3B1O00203 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms