Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL355355.2-201ENST00000442321 338 ntBASIC18.54■□□□□ 0.56
CCDC188H7C350 SEC1P-202ENST00000473944 940 ntBASIC18.54■□□□□ 0.56
CCDC188H7C350 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC188H7C350 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC188H7C350 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC188H7C350 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC188H7C350 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC188H7C350 AC113410.3-201ENST00000623366 203 ntBASIC18.54■□□□□ 0.56
CCDC188H7C350 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC188H7C350 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC188H7C350 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC188H7C350 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC188H7C350 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCDC188H7C350 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC188H7C350 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC188H7C350 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
CCDC188H7C350 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC188H7C350 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC188H7C350 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC188H7C350 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC188H7C350 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC188H7C350 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC188H7C350 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC188H7C350 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC188H7C350 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC188H7C350 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC188H7C350 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC188H7C350 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC188H7C350 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC188H7C350 RPS2P55-201ENST00000397318 883 ntBASIC18.53■□□□□ 0.56
CCDC188H7C350 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC188H7C350 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC188H7C350 AC107956.1-201ENST00000494359 873 ntBASIC18.53■□□□□ 0.56
CCDC188H7C350 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC188H7C350 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC188H7C350 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC188H7C350 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC188H7C350 AC106886.4-201ENST00000623557 2502 ntBASIC18.53■□□□□ 0.56
CCDC188H7C350 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CCDC188H7C350 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC188H7C350 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC188H7C350 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC188H7C350 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC188H7C350 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC188H7C350 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC188H7C350 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCDC188H7C350 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
CCDC188H7C350 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC188H7C350 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC188H7C350 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 AC012618.2-201ENST00000428058 849 ntBASIC18.52■□□□□ 0.56
CCDC188H7C350 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CCDC188H7C350 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC188H7C350 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CCDC188H7C350 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC188H7C350 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC188H7C350 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC188H7C350 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CCDC188H7C350 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
CCDC188H7C350 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC188H7C350 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC188H7C350 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.52■□□□□ 0.55
CCDC188H7C350 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC188H7C350 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC188H7C350 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC188H7C350 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms