Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AC005332.1-201ENST00000577698 1310 ntBASIC13.06□□□□□ -0.32
NACAE9PAV3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
NACAE9PAV3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NACAE9PAV3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NACAE9PAV3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NACAE9PAV3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.06□□□□□ -0.32
NACAE9PAV3 MIR564-202ENST00000385049 94 ntBASIC13.06□□□□□ -0.32
NACAE9PAV3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 UPK3BP1-201ENST00000428678 509 ntBASIC13.06□□□□□ -0.32
NACAE9PAV3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.06□□□□□ -0.32
NACAE9PAV3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.06□□□□□ -0.32
NACAE9PAV3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.06□□□□□ -0.32
NACAE9PAV3 AC087388.1-201ENST00000571370 1112 ntBASIC13.06□□□□□ -0.32
NACAE9PAV3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.06□□□□□ -0.32
NACAE9PAV3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
NACAE9PAV3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NACAE9PAV3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.05□□□□□ -0.32
NACAE9PAV3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NACAE9PAV3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
NACAE9PAV3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.05□□□□□ -0.32
NACAE9PAV3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.05□□□□□ -0.32
NACAE9PAV3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.05□□□□□ -0.32
NACAE9PAV3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NACAE9PAV3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 AL441883.1-201ENST00000566170 1045 ntBASIC13.05□□□□□ -0.32
NACAE9PAV3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.05□□□□□ -0.32
NACAE9PAV3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.05□□□□□ -0.32
NACAE9PAV3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.05□□□□□ -0.32
NACAE9PAV3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.05□□□□□ -0.32
NACAE9PAV3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NACAE9PAV3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.05□□□□□ -0.32
NACAE9PAV3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
NACAE9PAV3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.05□□□□□ -0.32
NACAE9PAV3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NACAE9PAV3 RNF152P1-201ENST00000397754 604 ntBASIC13.04□□□□□ -0.32
NACAE9PAV3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.04□□□□□ -0.32
NACAE9PAV3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 AL358472.4-201ENST00000633140 710 ntBASIC13.04□□□□□ -0.32
NACAE9PAV3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.04□□□□□ -0.32
NACAE9PAV3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.04□□□□□ -0.32
NACAE9PAV3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NACAE9PAV3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms