Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 TSPY9P-201ENST00000440215 945 ntBASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 TSPY11P-201ENST00000442607 1045 ntBASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 NME1-207ENST00000480143 964 ntTSL 2 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 AC133561.4-201ENST00000566112 224 ntBASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRBV20-1A0A075B6N2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.9□□□□□ -0.51
TRBV20-1A0A075B6N2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
TRBV20-1A0A075B6N2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
TRBV20-1A0A075B6N2 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
TRBV20-1A0A075B6N2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRBV20-1A0A075B6N2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TRBV20-1A0A075B6N2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.9□□□□□ -0.51
TRBV20-1A0A075B6N2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 AC138907.5-202ENST00000569484 235 ntBASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRBV20-1A0A075B6N2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
TRBV20-1A0A075B6N2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRBV20-1A0A075B6N2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRBV20-1A0A075B6N2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRBV20-1A0A075B6N2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
TRBV20-1A0A075B6N2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.88□□□□□ -0.51
TRBV20-1A0A075B6N2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRBV20-1A0A075B6N2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms