Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 AL096828.2-201ENST00000567259 1965 ntBASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.89■□□□□ 0.29
CLCA3PQ9Y6N3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 KRT18P1-202ENST00000452408 1331 ntBASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 AC099398.1-201ENST00000567919 2776 ntBASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA3PQ9Y6N3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 AC009154.2-201ENST00000621177 724 ntBASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 AC124864.1-201ENST00000623408 392 ntBASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLCA3PQ9Y6N3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 AC093010.1-201ENST00000473625 1624 ntBASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCA3PQ9Y6N3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms