Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 AC091607.1-201ENST00000490318 1060 ntBASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAI2Q9Y5P3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 AC233702.3-201ENST00000578656 1387 ntBASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 VENTXP7-201ENST00000475503 772 ntBASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAI2Q9Y5P3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 EMBP1-201ENST00000458200 901 ntBASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 AP000867.3-201ENST00000524675 377 ntBASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 AP005901.3-202ENST00000581653 237 ntBASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.04■□□□□ 0.48
RAI2Q9Y5P3 AC008764.6-201ENST00000595909 2069 ntBASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RAI2Q9Y5P3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms