Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 AC092865.5-201ENST00000545435 363 ntBASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 INTS4P1-201ENST00000438455 1935 ntBASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGA9Q9Y5G4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 AC020763.4-201ENST00000623414 4170 ntBASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 POLD2P1-201ENST00000511220 997 ntBASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA9Q9Y5G4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 BX842568.4-201ENST00000421222 227 ntBASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 AC011467.2-201ENST00000598425 242 ntBASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 AL049840.3-201ENST00000602669 611 ntBASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 AL138831.2-201ENST00000606564 490 ntBASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 AP001269.4-201ENST00000609611 512 ntBASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 AC083906.6-201ENST00000641366 219 ntBASIC16.66■□□□□ 0.26
PCDHGA9Q9Y5G4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms