Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.95■□□□□ 0.46
PKP3Q9Y446 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP3Q9Y446 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.95■□□□□ 0.46
PKP3Q9Y446 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PKP3Q9Y446 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.95■□□□□ 0.46
PKP3Q9Y446 IGHV3-41-201ENST00000613121 348 ntBASIC17.95■□□□□ 0.46
PKP3Q9Y446 AC116407.2-201ENST00000613639 860 ntBASIC17.95■□□□□ 0.46
PKP3Q9Y446 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.95■□□□□ 0.46
PKP3Q9Y446 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP3Q9Y446 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP3Q9Y446 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP3Q9Y446 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP3Q9Y446 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PKP3Q9Y446 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.95■□□□□ 0.46
PKP3Q9Y446 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP3Q9Y446 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PKP3Q9Y446 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKP3Q9Y446 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 MTCL1P1-201ENST00000446207 792 ntBASIC17.94■□□□□ 0.46
PKP3Q9Y446 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 AC068472.1-201ENST00000474589 881 ntBASIC17.94■□□□□ 0.46
PKP3Q9Y446 AC112698.1-201ENST00000510299 916 ntBASIC17.94■□□□□ 0.46
PKP3Q9Y446 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PKP3Q9Y446 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.94■□□□□ 0.46
PKP3Q9Y446 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
PKP3Q9Y446 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PKP3Q9Y446 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.93■□□□□ 0.46
PKP3Q9Y446 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.93■□□□□ 0.46
PKP3Q9Y446 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.93■□□□□ 0.46
PKP3Q9Y446 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.93■□□□□ 0.46
PKP3Q9Y446 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 AC124864.1-201ENST00000623408 392 ntBASIC17.93■□□□□ 0.46
PKP3Q9Y446 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PKP3Q9Y446 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PKP3Q9Y446 AC008764.6-201ENST00000595909 2069 ntBASIC17.93■□□□□ 0.46
PKP3Q9Y446 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.93■□□□□ 0.46
PKP3Q9Y446 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PKP3Q9Y446 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP3Q9Y446 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.93■□□□□ 0.46
PKP3Q9Y446 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 NOC2LP2-201ENST00000407594 1944 ntBASIC17.92■□□□□ 0.46
PKP3Q9Y446 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 AC100803.2-201ENST00000562459 1963 ntBASIC17.92■□□□□ 0.46
PKP3Q9Y446 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PKP3Q9Y446 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP3Q9Y446 CHCHD2P8-201ENST00000429873 447 ntBASIC17.92■□□□□ 0.46
PKP3Q9Y446 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms