Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 TERF1P1-201ENST00000311003 1181 ntBASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 AC139887.4-201ENST00000607877 719 ntBASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 AL031432.5-201ENST00000641059 760 ntBASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 AL391807.1-203ENST00000604392 2365 ntBASIC17.42■□□□□ 0.38
RNF11Q9Y3C5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 AC024563.2-201ENST00000603282 481 ntBASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
RNF11Q9Y3C5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 AC073508.3-201ENST00000619697 1419 ntBASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 AC005521.1-201ENST00000393351 872 ntBASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 SPDYE15P-201ENST00000424157 909 ntBASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 BX664615.1-201ENST00000443558 458 ntBASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 YBX1P2-201ENST00000489612 999 ntBASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 AL136038.4-201ENST00000603606 1261 ntBASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF11Q9Y3C5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms