Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MTDHP1-201ENST00000605323 784 ntBASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 LINC01126-201ENST00000623515 1646 ntBASIC14.63□□□□□ -0.07
RCL1Q9Y2P8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 AC105020.1-201ENST00000435356 2205 ntBASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 GPAT2P1-201ENST00000444924 1672 ntBASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 PCDHA14-201ENST00000506751 2298 ntBASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 LINC00304-203ENST00000565008 1864 ntBASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 AC100803.2-201ENST00000562459 1963 ntBASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.62□□□□□ -0.07
RCL1Q9Y2P8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 AL162727.3-201ENST00000635661 2787 ntBASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 IKBKGP1-201ENST00000612193 1073 ntBASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RCL1Q9Y2P8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms