Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 REXO1L9P-201ENST00000604264 2108 ntBASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 LINC00167-201ENST00000530583 1419 ntBASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 AC074051.2-201ENST00000565115 352 ntBASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 AL390719.2-201ENST00000606993 987 ntBASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 GPALPP1-207ENST00000611650 899 ntBASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 AC004263.2-201ENST00000617183 678 ntBASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 LINC01126-201ENST00000623515 1646 ntBASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.26■□□□□ 0.51
FNDC3AQ9Y2H6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 AP003733.1-201ENST00000491725 852 ntBASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 AC079776.4-201ENST00000511039 504 ntBASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 AC106795.1-205ENST00000512851 1056 ntBASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 AC090616.6-201ENST00000582640 721 ntBASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FNDC3AQ9Y2H6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 AL024508.2-201ENST00000607749 1894 ntBASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 KRT16P4-201ENST00000453883 522 ntBASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.24■□□□□ 0.51
FNDC3AQ9Y2H6 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms