Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 AP002469.2-201ENST00000531724 424 ntBASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPA1Q9UND3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 AP000347.1-202ENST00000435868 847 ntBASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 AC008687.5-201ENST00000593746 558 ntBASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 GMCL1P1-201ENST00000463439 1581 ntBASIC16.47■□□□□ 0.23
NPIPA1Q9UND3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 TSPY12P-201ENST00000421279 868 ntBASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 AC135776.1-201ENST00000319817 2481 ntBASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA1Q9UND3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms