Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 AC007967.3-201ENST00000434308 558 ntBASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 HCG4P8-203ENST00000443049 980 ntBASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 AC074051.2-201ENST00000565115 352 ntBASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 AC012615.1-201ENST00000565797 1299 ntBASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
PCDHA4Q9UN74 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 BX276092.7-203ENST00000637198 1536 ntBASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHA4Q9UN74 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 COX5BP2-201ENST00000392354 334 ntBASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 AC104819.1-201ENST00000504587 486 ntBASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 AC009533.2-201ENST00000543664 586 ntBASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHA4Q9UN74 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 REXO1L11P-201ENST00000620964 1927 ntBASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.35■□□□□ 0.85
PCDHA4Q9UN74 MINOS1P3-201ENST00000457048 203 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms