Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSFQ9UBX1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 AC010460.3-201ENST00000511359 1579 ntBASIC16.77■□□□□ 0.28
CTSFQ9UBX1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 AC100803.2-201ENST00000562459 1963 ntBASIC16.77■□□□□ 0.28
CTSFQ9UBX1 NEFHP1-201ENST00000412845 2629 ntBASIC16.77■□□□□ 0.28
CTSFQ9UBX1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSFQ9UBX1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CTSFQ9UBX1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTSFQ9UBX1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSFQ9UBX1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CTSFQ9UBX1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSFQ9UBX1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.77■□□□□ 0.27
CTSFQ9UBX1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSFQ9UBX1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.77■□□□□ 0.27
CTSFQ9UBX1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 AC106795.1-205ENST00000512851 1056 ntBASIC16.76■□□□□ 0.27
CTSFQ9UBX1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 AL355877.3-201ENST00000622820 899 ntBASIC16.76■□□□□ 0.27
CTSFQ9UBX1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSFQ9UBX1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 FAM220CP-201ENST00000395253 831 ntBASIC16.75■□□□□ 0.27
CTSFQ9UBX1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 RBM17P3-201ENST00000417687 1192 ntBASIC16.75■□□□□ 0.27
CTSFQ9UBX1 AC096633.1-201ENST00000422446 749 ntBASIC16.75■□□□□ 0.27
CTSFQ9UBX1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms