Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 YBX2P1-201ENST00000394192 760 ntBASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 SPDYE21P-201ENST00000413323 827 ntBASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 DUTP2-201ENST00000519164 463 ntBASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 AC040169.1-201ENST00000565382 521 ntBASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 SIGLEC16-201ENST00000599858 1437 ntBASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 GPX1P2-201ENST00000429271 606 ntBASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 AC103564.2-201ENST00000432853 1299 ntBASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 AC112482.1-201ENST00000492080 688 ntBASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 RNA5SP416-201ENST00000516838 111 ntBASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 AC073592.5-201ENST00000624854 528 ntBASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
DNMT3BQ9UBC3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 AC006557.2-201ENST00000592985 1240 ntBASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 MIR1199-201ENST00000621445 119 ntBASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3BQ9UBC3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 AC022898.2-201ENST00000616822 1312 ntBASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 AC005593.1-201ENST00000624894 515 ntBASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3BQ9UBC3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms