Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VAPAQ9P0L0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 PVRIG2P-201ENST00000435460 978 ntBASIC16.88■□□□□ 0.29
VAPAQ9P0L0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 LINC01451-201ENST00000623792 534 ntBASIC16.88■□□□□ 0.29
VAPAQ9P0L0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAPAQ9P0L0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 CYP2D8P-201ENST00000433633 1490 ntBASIC16.87■□□□□ 0.29
VAPAQ9P0L0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 MIR718-201ENST00000390190 70 ntBASIC16.87■□□□□ 0.29
VAPAQ9P0L0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 AC116407.2-201ENST00000613639 860 ntBASIC16.87■□□□□ 0.29
VAPAQ9P0L0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 AC092865.7-201ENST00000641832 219 ntBASIC16.87■□□□□ 0.29
VAPAQ9P0L0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VAPAQ9P0L0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.86■□□□□ 0.29
VAPAQ9P0L0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 AC128688.1-201ENST00000487626 519 ntBASIC16.86■□□□□ 0.29
VAPAQ9P0L0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 AL157888.1-201ENST00000631930 593 ntBASIC16.86■□□□□ 0.29
VAPAQ9P0L0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
VAPAQ9P0L0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms