Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
KCMF1Q9P0J7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 MIR3180-1-201ENST00000580374 94 ntBASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 MIR3180-3-201ENST00000584616 94 ntBASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 NPAP1P7-201ENST00000613027 823 ntBASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 AL133373.2-201ENST00000623187 2828 ntBASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KCMF1Q9P0J7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 AC068880.1-201ENST00000507289 2297 ntBASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
KCMF1Q9P0J7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
KCMF1Q9P0J7 AC006116.8-202ENST00000587620 1550 ntBASIC16.89■□□□□ 0.3
KCMF1Q9P0J7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KCMF1Q9P0J7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KCMF1Q9P0J7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCMF1Q9P0J7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.89■□□□□ 0.29
KCMF1Q9P0J7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KCMF1Q9P0J7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCMF1Q9P0J7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.89■□□□□ 0.29
KCMF1Q9P0J7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KCMF1Q9P0J7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
KCMF1Q9P0J7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KCMF1Q9P0J7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms