Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 AC008764.6-201ENST00000595909 2069 ntBASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 AL845331.1-201ENST00000424978 1190 ntBASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 AC112698.1-201ENST00000510299 916 ntBASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 AC090616.6-201ENST00000582640 721 ntBASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 AC023511.2-201ENST00000618803 211 ntBASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CUEDC1Q9NWM3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 AC005332.8-201ENST00000622750 2735 ntBASIC17.27■□□□□ 0.35
CUEDC1Q9NWM3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 KRT18P1-202ENST00000452408 1331 ntBASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 AC022898.2-201ENST00000616822 1312 ntBASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 AP002414.4-201ENST00000589764 1148 ntBASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 NPAP1P7-201ENST00000613027 823 ntBASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUEDC1Q9NWM3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.25■□□□□ 0.35
CUEDC1Q9NWM3 KRT8P10-201ENST00000450021 1447 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms