Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 AC010460.3-201ENST00000511359 1579 ntBASIC20.72■□□□□ 0.91
RNF216Q9NWF9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF216Q9NWF9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 AL139384.1-201ENST00000612143 3047 ntBASIC20.71■□□□□ 0.91
RNF216Q9NWF9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 AC009113.1-201ENST00000570267 2443 ntBASIC20.71■□□□□ 0.91
RNF216Q9NWF9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 AL139824.2-201ENST00000458731 1095 ntBASIC20.71■□□□□ 0.91
RNF216Q9NWF9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 MTND3P12-201ENST00000559068 328 ntBASIC20.71■□□□□ 0.91
RNF216Q9NWF9 AL136038.3-201ENST00000561909 1096 ntBASIC20.71■□□□□ 0.91
RNF216Q9NWF9 AC074051.4-201ENST00000564888 892 ntBASIC20.71■□□□□ 0.91
RNF216Q9NWF9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 AC084824.4-201ENST00000620106 731 ntBASIC20.71■□□□□ 0.91
RNF216Q9NWF9 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF216Q9NWF9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.7■□□□□ 0.91
RNF216Q9NWF9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RNF216Q9NWF9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 Z99129.2-201ENST00000619967 314 ntBASIC20.7■□□□□ 0.9
RNF216Q9NWF9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF216Q9NWF9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF216Q9NWF9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF216Q9NWF9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF216Q9NWF9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF216Q9NWF9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF216Q9NWF9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF216Q9NWF9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF216Q9NWF9 CROCCP3-202ENST00000420820 1947 ntBASIC20.69■□□□□ 0.9
RNF216Q9NWF9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RNF216Q9NWF9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms