Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 KRT17P2-201ENST00000300992 1314 ntBASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOMER3Q9NSC5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 AC100803.2-201ENST00000562459 1963 ntBASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 AL390955.1-201ENST00000428694 934 ntBASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 MIR3917-201ENST00000580971 93 ntBASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 LINC01451-201ENST00000623792 534 ntBASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
HOMER3Q9NSC5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 PVRIG2P-201ENST00000435460 978 ntBASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 AC008550.1-201ENST00000511500 884 ntBASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 AC024243.1-201ENST00000609234 778 ntBASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 HLA-J-201ENST00000462773 1622 ntBASIC18.6■□□□□ 0.57
HOMER3Q9NSC5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOMER3Q9NSC5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOMER3Q9NSC5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOMER3Q9NSC5 LINC00167-201ENST00000530583 1419 ntBASIC18.59■□□□□ 0.57
HOMER3Q9NSC5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
HOMER3Q9NSC5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.59■□□□□ 0.57
HOMER3Q9NSC5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOMER3Q9NSC5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOMER3Q9NSC5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOMER3Q9NSC5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.59■□□□□ 0.57
HOMER3Q9NSC5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOMER3Q9NSC5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms