Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 AC073592.3-201ENST00000625118 1834 ntBASIC16.84■□□□□ 0.29
KLHL1Q9NR64 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 NOC2LP2-201ENST00000407594 1944 ntBASIC16.84■□□□□ 0.29
KLHL1Q9NR64 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL1Q9NR64 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
KLHL1Q9NR64 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
KLHL1Q9NR64 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
KLHL1Q9NR64 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KLHL1Q9NR64 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 AC024563.2-201ENST00000603282 481 ntBASIC16.83■□□□□ 0.28
KLHL1Q9NR64 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KLHL1Q9NR64 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 TOB2P1-201ENST00000469761 992 ntBASIC16.82■□□□□ 0.28
KLHL1Q9NR64 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 GPR32P1-201ENST00000601788 811 ntBASIC16.82■□□□□ 0.28
KLHL1Q9NR64 AL390719.2-201ENST00000606993 987 ntBASIC16.82■□□□□ 0.28
KLHL1Q9NR64 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KLHL1Q9NR64 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 AC026396.1-201ENST00000419388 421 ntBASIC16.81■□□□□ 0.28
KLHL1Q9NR64 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.81■□□□□ 0.28
KLHL1Q9NR64 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms