Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 KRT18P6-201ENST00000555540 1265 ntBASIC21.93■■□□□ 1.1
UPF2Q9HAU5 MIR3180-4-201ENST00000582223 153 ntBASIC21.93■■□□□ 1.1
UPF2Q9HAU5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 CD177P1-201ENST00000606252 935 ntBASIC21.92■■□□□ 1.1
UPF2Q9HAU5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
UPF2Q9HAU5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.91■■□□□ 1.1
UPF2Q9HAU5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 AL135905.2-201ENST00000584934 1404 ntBASIC21.91■■□□□ 1.1
UPF2Q9HAU5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 AC100803.2-201ENST00000562459 1963 ntBASIC21.91■■□□□ 1.1
UPF2Q9HAU5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.91■■□□□ 1.1
UPF2Q9HAU5 AC128676.1-201ENST00000454392 318 ntBASIC21.91■■□□□ 1.1
UPF2Q9HAU5 RPPH1-201ENST00000516869 333 ntBASIC21.91■■□□□ 1.1
UPF2Q9HAU5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UPF2Q9HAU5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF2Q9HAU5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
UPF2Q9HAU5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
UPF2Q9HAU5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.89■■□□□ 1.1
UPF2Q9HAU5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.1
UPF2Q9HAU5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms