Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 AC005336.2-201ENST00000593183 939 ntBASIC18.81■□□□□ 0.6
LHX5Q9H2C1 AL138831.2-201ENST00000606564 490 ntBASIC18.81■□□□□ 0.6
LHX5Q9H2C1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LHX5Q9H2C1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 COX5BP2-201ENST00000392354 334 ntBASIC18.8■□□□□ 0.6
LHX5Q9H2C1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 AL121894.2-201ENST00000602977 491 ntBASIC18.8■□□□□ 0.6
LHX5Q9H2C1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.8■□□□□ 0.6
LHX5Q9H2C1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LHX5Q9H2C1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 KRT18P1-202ENST00000452408 1331 ntBASIC18.79■□□□□ 0.6
LHX5Q9H2C1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 AL450487.1-201ENST00000426799 995 ntBASIC18.79■□□□□ 0.6
LHX5Q9H2C1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 AC005104.2-201ENST00000427818 678 ntBASIC18.79■□□□□ 0.6
LHX5Q9H2C1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 TPSP2-201ENST00000561760 610 ntBASIC18.79■□□□□ 0.6
LHX5Q9H2C1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 AC010460.3-201ENST00000511359 1579 ntBASIC18.79■□□□□ 0.6
LHX5Q9H2C1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.79■□□□□ 0.6
LHX5Q9H2C1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX5Q9H2C1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX5Q9H2C1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LHX5Q9H2C1 HLA-J-201ENST00000462773 1622 ntBASIC18.78■□□□□ 0.6
LHX5Q9H2C1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX5Q9H2C1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX5Q9H2C1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LHX5Q9H2C1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX5Q9H2C1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX5Q9H2C1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX5Q9H2C1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LHX5Q9H2C1 AC005332.8-201ENST00000622750 2735 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms