Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
STRADBQ9C0K7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.89■□□□□ 0.3
STRADBQ9C0K7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
STRADBQ9C0K7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
STRADBQ9C0K7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
STRADBQ9C0K7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
STRADBQ9C0K7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 AC093010.1-201ENST00000473625 1624 ntBASIC16.89■□□□□ 0.29
STRADBQ9C0K7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 AC023274.1-201ENST00000418278 595 ntBASIC16.89■□□□□ 0.29
STRADBQ9C0K7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 DUTP2-201ENST00000519164 463 ntBASIC16.89■□□□□ 0.29
STRADBQ9C0K7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
STRADBQ9C0K7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 AC073621.1-201ENST00000392730 636 ntBASIC16.88■□□□□ 0.29
STRADBQ9C0K7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 PMS2P2-201ENST00000425039 1128 ntBASIC16.88■□□□□ 0.29
STRADBQ9C0K7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 AC134684.3-201ENST00000641758 218 ntBASIC16.88■□□□□ 0.29
STRADBQ9C0K7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 KRT8P47-201ENST00000604727 1398 ntBASIC16.88■□□□□ 0.29
STRADBQ9C0K7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
STRADBQ9C0K7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
STRADBQ9C0K7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
STRADBQ9C0K7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
STRADBQ9C0K7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.87■□□□□ 0.29
STRADBQ9C0K7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
STRADBQ9C0K7 AC004817.3-201ENST00000602957 2129 ntBASIC16.87■□□□□ 0.29
STRADBQ9C0K7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
STRADBQ9C0K7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.87■□□□□ 0.29
STRADBQ9C0K7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms