Protein–RNA interactions for Protein: Q9C099

LRRCC1, Leucine-rich repeat and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1Q9C099 KRT18P1-202ENST00000452408 1331 ntBASIC22■■□□□ 1.11
LRRCC1Q9C099 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
LRRCC1Q9C099 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 AC096633.1-201ENST00000422446 749 ntBASIC21.99■■□□□ 1.11
LRRCC1Q9C099 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 AC069148.1-201ENST00000608741 768 ntBASIC21.99■■□□□ 1.11
LRRCC1Q9C099 LINC00896-202ENST00000609602 2128 ntBASIC21.99■■□□□ 1.11
LRRCC1Q9C099 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 AL355312.1-201ENST00000407115 2176 ntBASIC21.99■■□□□ 1.11
LRRCC1Q9C099 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRCC1Q9C099 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 AC246785.2-201ENST00000432512 513 ntBASIC21.98■■□□□ 1.11
LRRCC1Q9C099 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 AC005336.2-201ENST00000593183 939 ntBASIC21.98■■□□□ 1.11
LRRCC1Q9C099 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 AC097374.2-201ENST00000618617 1306 ntBASIC21.98■■□□□ 1.11
LRRCC1Q9C099 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.98■■□□□ 1.11
LRRCC1Q9C099 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 DRAXINP1-201ENST00000437611 948 ntBASIC21.97■■□□□ 1.11
LRRCC1Q9C099 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 AC091607.1-201ENST00000490318 1060 ntBASIC21.97■■□□□ 1.11
LRRCC1Q9C099 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 TPSP2-201ENST00000561760 610 ntBASIC21.97■■□□□ 1.11
LRRCC1Q9C099 AP002414.4-201ENST00000589764 1148 ntBASIC21.97■■□□□ 1.11
LRRCC1Q9C099 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.97■■□□□ 1.11
LRRCC1Q9C099 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
LRRCC1Q9C099 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 REXO1L11P-201ENST00000620964 1927 ntBASIC21.96■■□□□ 1.11
LRRCC1Q9C099 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 NPAP1P7-201ENST00000613027 823 ntBASIC21.96■■□□□ 1.11
LRRCC1Q9C099 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRRCC1Q9C099 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms