Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 AF186996.4-201ENST00000467186 377 ntBASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.18■□□□□ 0.98
CRNKL1Q9BZJ0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 DDX43P3-201ENST00000441064 443 ntBASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 AL773604.1-201ENST00000617417 272 ntBASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 KRT18P55-202ENST00000578578 1546 ntBASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 HCG11-201ENST00000411553 5696 ntBASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.17■□□□□ 0.98
CRNKL1Q9BZJ0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 AL356309.3-201ENST00000624132 1934 ntBASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 AC138028.4-201ENST00000564984 1845 ntBASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 HLA-A-201ENST00000376802 1334 ntBASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 AC073648.2-201ENST00000510116 352 ntBASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRNKL1Q9BZJ0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 RNPS1P1-201ENST00000507437 918 ntBASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 SART3-203ENST00000546611 1184 ntBASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 AD001527.2-201ENST00000622994 785 ntBASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 AL139288.1-201ENST00000623748 933 ntBASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.15■□□□□ 0.98
CRNKL1Q9BZJ0 PMPCAP1-201ENST00000508114 1576 ntBASIC21.14■□□□□ 0.98
CRNKL1Q9BZJ0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms